Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL16O15467 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL16O15467 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CCL16O15467 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCL16O15467 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL16O15467 AC024909.3-201ENST00000611513 2257 ntBASIC16.06■□□□□ 0.16
CCL16O15467 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 AL023775.1-201ENST00000454907 1746 ntBASIC16.06■□□□□ 0.16
CCL16O15467 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 KRT8P14-201ENST00000414254 1442 ntBASIC16.06■□□□□ 0.16
CCL16O15467 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL16O15467 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL16O15467 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CCL16O15467 AC004945.1-201ENST00000416738 983 ntBASIC16.06■□□□□ 0.16
CCL16O15467 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL16O15467 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL16O15467 FNTAP2-201ENST00000430308 634 ntBASIC16.06■□□□□ 0.16
CCL16O15467 FAM8A4P-201ENST00000435433 1213 ntBASIC16.06■□□□□ 0.16
CCL16O15467 AKR7A2P1-201ENST00000460134 915 ntBASIC16.06■□□□□ 0.16
CCL16O15467 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL16O15467 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.06■□□□□ 0.16
CCL16O15467 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL16O15467 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCL16O15467 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CCL16O15467 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL16O15467 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 AC018735.1-201ENST00000437208 1502 ntBASIC16.05■□□□□ 0.16
CCL16O15467 AC092127.1-201ENST00000567093 3455 ntBASIC16.05■□□□□ 0.16
CCL16O15467 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.05■□□□□ 0.16
CCL16O15467 EIF3FP3-201ENST00000434851 1086 ntBASIC16.05■□□□□ 0.16
CCL16O15467 AC004898.1-201ENST00000451057 766 ntBASIC16.05■□□□□ 0.16
CCL16O15467 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL16O15467 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL16O15467 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL16O15467 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 AC010491.1-201ENST00000563101 2797 ntBASIC16.05■□□□□ 0.16
CCL16O15467 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL16O15467 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL16O15467 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
CCL16O15467 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL16O15467 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL16O15467 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL16O15467 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCL16O15467 AL603832.2-201ENST00000566195 2125 ntBASIC16.04■□□□□ 0.16
CCL16O15467 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL16O15467 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL16O15467 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL16O15467 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL16O15467 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL16O15467 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL16O15467 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms