Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC7O00311 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC7O00311 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CDC7O00311 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC7O00311 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC7O00311 AL158211.3-201ENST00000607385 239 ntBASIC15.26■□□□□ 0.03
CDC7O00311 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC7O00311 AL590560.3-201ENST00000623350 461 ntBASIC15.26■□□□□ 0.03
CDC7O00311 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC7O00311 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDC7O00311 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 MROH4P-201ENST00000431302 1578 ntBASIC15.26■□□□□ 0.03
CDC7O00311 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 AL121723.1-201ENST00000445194 1519 ntBASIC15.26■□□□□ 0.03
CDC7O00311 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC7O00311 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDC7O00311 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.25■□□□□ 0.03
CDC7O00311 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 TOMM22P5-201ENST00000416399 439 ntBASIC15.25■□□□□ 0.03
CDC7O00311 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.25■□□□□ 0.03
CDC7O00311 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC7O00311 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 ZBED1P1-201ENST00000502364 1930 ntBASIC15.25■□□□□ 0.03
CDC7O00311 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC7O00311 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC7O00311 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CDC7O00311 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDC7O00311 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDC7O00311 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms