Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.58□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.58□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 KRT8P39-201ENST00000396270 1433 ntBASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC009154.2-201ENST00000621177 724 ntBASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC010947.1-201ENST00000623454 693 ntBASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AC131212.3-201ENST00000624087 4219 ntBASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 KRT8P24-201ENST00000560290 1559 ntBASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 CYP2D8P-201ENST00000433633 1490 ntBASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TSPY15P-201ENST00000457163 923 ntBASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
BOLA2-SMG1P6H3BVE0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms