Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SBNO1A3KN83 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SBNO1A3KN83 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 PCDH8P1-201ENST00000428983 2773 ntBASIC20.66■□□□□ 0.9
SBNO1A3KN83 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 FGFR3P1-201ENST00000449999 601 ntBASIC20.66■□□□□ 0.9
SBNO1A3KN83 NOC2LP1-201ENST00000450578 752 ntBASIC20.66■□□□□ 0.9
SBNO1A3KN83 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 RN7SL736P-201ENST00000613111 269 ntBASIC20.66■□□□□ 0.9
SBNO1A3KN83 AC103691.2-201ENST00000618824 433 ntBASIC20.66■□□□□ 0.9
SBNO1A3KN83 COX6A1P2-201ENST00000620597 330 ntBASIC20.66■□□□□ 0.9
SBNO1A3KN83 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SBNO1A3KN83 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.66■□□□□ 0.9
SBNO1A3KN83 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 AC010141.1-201ENST00000411585 623 ntBASIC20.65■□□□□ 0.9
SBNO1A3KN83 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 SNORD3B-2-202ENST00000571722 791 ntBASIC20.65■□□□□ 0.9
SBNO1A3KN83 AC012044.1-201ENST00000603431 297 ntBASIC20.65■□□□□ 0.9
SBNO1A3KN83 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SBNO1A3KN83 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SBNO1A3KN83 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SBNO1A3KN83 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.64■□□□□ 0.9
SBNO1A3KN83 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SBNO1A3KN83 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.64■□□□□ 0.9
SBNO1A3KN83 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.64■□□□□ 0.9
SBNO1A3KN83 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SBNO1A3KN83 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.64■□□□□ 0.9
SBNO1A3KN83 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SBNO1A3KN83 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 AC114501.1-201ENST00000445949 172 ntBASIC20.64■□□□□ 0.89
SBNO1A3KN83 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.64■□□□□ 0.89
SBNO1A3KN83 RTN3P1-201ENST00000536295 711 ntBASIC20.64■□□□□ 0.89
SBNO1A3KN83 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.64■□□□□ 0.89
SBNO1A3KN83 AC127383.1-201ENST00000444697 1800 ntBASIC20.64■□□□□ 0.89
SBNO1A3KN83 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SBNO1A3KN83 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.64■□□□□ 0.89
SBNO1A3KN83 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.64■□□□□ 0.89
SBNO1A3KN83 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms