Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHISA3A0PJX4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AL139010.1-201ENST00000454878 894 ntBASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AF186996.4-201ENST00000467186 377 ntBASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AC004877.2-201ENST00000623941 599 ntBASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 BCAR1-209ENST00000546196 1340 ntBASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 REXO1L4P-201ENST00000605109 1937 ntBASIC13.54□□□□□ -0.24
SHISA3A0PJX4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHISA3A0PJX4 CICP8-201ENST00000455800 2813 ntBASIC13.54□□□□□ -0.24
SHISA3A0PJX4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 RPS2P28-201ENST00000314255 741 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 FAM220BP-201ENST00000377689 816 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 KRT19P2-202ENST00000557173 1012 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms