Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 AL607033.1-201ENST00000623900 1599 ntBASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DUXBA0A1W2PPF3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 AC041040.2-201ENST00000622926 2899 ntBASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 AC068137.2-201ENST00000605408 478 ntBASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
DUXBA0A1W2PPF3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DUXBA0A1W2PPF3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AKAP8P1-201ENST00000434743 1349 ntBASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 HLA-H-201ENST00000383620 1096 ntBASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AC098831.1-202ENST00000438821 336 ntBASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 AL121912.1-201ENST00000603683 238 ntBASIC12.7□□□□□ -0.38
DUXBA0A1W2PPF3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms