Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC39.4■■■■□ 3.9
BIVM-ERCC5R4GMW8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC39.4■■■■□ 3.9
BIVM-ERCC5R4GMW8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC39.4■■■■□ 3.9
BIVM-ERCC5R4GMW8 AC142381.2-201ENST00000566120 298 ntBASIC39.4■■■■□ 3.9
BIVM-ERCC5R4GMW8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC39.4■■■■□ 3.9
BIVM-ERCC5R4GMW8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC39.39■■■■□ 3.9
BIVM-ERCC5R4GMW8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC39.39■■■■□ 3.9
BIVM-ERCC5R4GMW8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
BIVM-ERCC5R4GMW8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC39.39■■■■□ 3.9
BIVM-ERCC5R4GMW8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC39.39■■■■□ 3.9
BIVM-ERCC5R4GMW8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC39.38■■■■□ 3.89
BIVM-ERCC5R4GMW8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
BIVM-ERCC5R4GMW8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC39.38■■■■□ 3.89
BIVM-ERCC5R4GMW8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
BIVM-ERCC5R4GMW8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 AP001330.3-201ENST00000520123 633 ntBASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 EDA-201ENST00000338901 1233 ntBASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
BIVM-ERCC5R4GMW8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
BIVM-ERCC5R4GMW8 SF1-220ENST00000626028 704 ntTSL 2 BASIC39.35■■■■□ 3.89
BIVM-ERCC5R4GMW8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
BIVM-ERCC5R4GMW8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC39.35■■■■□ 3.89
BIVM-ERCC5R4GMW8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC39.35■■■■□ 3.89
BIVM-ERCC5R4GMW8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
BIVM-ERCC5R4GMW8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC39.34■■■■□ 3.89
BIVM-ERCC5R4GMW8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC39.33■■■■□ 3.89
BIVM-ERCC5R4GMW8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC39.32■■■■□ 3.89
BIVM-ERCC5R4GMW8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
BIVM-ERCC5R4GMW8 SRD5A1P1-201ENST00000442297 786 ntBASIC39.32■■■■□ 3.88
BIVM-ERCC5R4GMW8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
BIVM-ERCC5R4GMW8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC39.31■■■■□ 3.88
BIVM-ERCC5R4GMW8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
BIVM-ERCC5R4GMW8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC39.31■■■■□ 3.88
BIVM-ERCC5R4GMW8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC39.31■■■■□ 3.88
BIVM-ERCC5R4GMW8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC39.31■■■■□ 3.88
BIVM-ERCC5R4GMW8 MIR939-201ENST00000401314 82 ntBASIC39.3■■■■□ 3.88
BIVM-ERCC5R4GMW8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
BIVM-ERCC5R4GMW8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 MIR6089-201ENST00000616698 64 ntBASIC39.29■■■■□ 3.88
BIVM-ERCC5R4GMW8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC39.28■■■■□ 3.88
BIVM-ERCC5R4GMW8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
BIVM-ERCC5R4GMW8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
BIVM-ERCC5R4GMW8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
BIVM-ERCC5R4GMW8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
BIVM-ERCC5R4GMW8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC39.27■■■■□ 3.88
BIVM-ERCC5R4GMW8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
BIVM-ERCC5R4GMW8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC39.27■■■■□ 3.88
BIVM-ERCC5R4GMW8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC39.26■■■■□ 3.88
BIVM-ERCC5R4GMW8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC39.26■■■■□ 3.88
BIVM-ERCC5R4GMW8 AC105265.2-201ENST00000467189 838 ntBASIC39.26■■■■□ 3.88
BIVM-ERCC5R4GMW8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC39.26■■■■□ 3.88
BIVM-ERCC5R4GMW8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC39.26■■■■□ 3.87
BIVM-ERCC5R4GMW8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC39.25■■■■□ 3.87
BIVM-ERCC5R4GMW8 AF213884.3-201ENST00000563833 479 ntBASIC39.25■■■■□ 3.87
BIVM-ERCC5R4GMW8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC39.25■■■■□ 3.87
BIVM-ERCC5R4GMW8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
BIVM-ERCC5R4GMW8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
BIVM-ERCC5R4GMW8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
BIVM-ERCC5R4GMW8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
BIVM-ERCC5R4GMW8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC39.24■■■■□ 3.87
BIVM-ERCC5R4GMW8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC39.24■■■■□ 3.87
BIVM-ERCC5R4GMW8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
BIVM-ERCC5R4GMW8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC39.24■■■■□ 3.87
BIVM-ERCC5R4GMW8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
BIVM-ERCC5R4GMW8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC39.23■■■■□ 3.87
BIVM-ERCC5R4GMW8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
BIVM-ERCC5R4GMW8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
BIVM-ERCC5R4GMW8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC39.23■■■■□ 3.87
BIVM-ERCC5R4GMW8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
BIVM-ERCC5R4GMW8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC39.21■■■■□ 3.87
BIVM-ERCC5R4GMW8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC39.2■■■■□ 3.87
BIVM-ERCC5R4GMW8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC39.2■■■■□ 3.87
BIVM-ERCC5R4GMW8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
BIVM-ERCC5R4GMW8 AC005703.6-201ENST00000623265 1329 ntBASIC39.2■■■■□ 3.87
BIVM-ERCC5R4GMW8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC39.2■■■■□ 3.87
BIVM-ERCC5R4GMW8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC39.19■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms