Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
SNCAIPQ9Y6H5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNCAIPQ9Y6H5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
SNCAIPQ9Y6H5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNCAIPQ9Y6H5 ERN1-208ENST00000606895 2068 ntBASIC27.33■■□□□ 1.97
SNCAIPQ9Y6H5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNCAIPQ9Y6H5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.96
SNCAIPQ9Y6H5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
SNCAIPQ9Y6H5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNCAIPQ9Y6H5 MIR5787-201ENST00000611784 55 ntBASIC27.32■■□□□ 1.96
SNCAIPQ9Y6H5 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.32■■□□□ 1.96
SNCAIPQ9Y6H5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SNCAIPQ9Y6H5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNCAIPQ9Y6H5 MIR939-201ENST00000401314 82 ntBASIC27.31■■□□□ 1.96
SNCAIPQ9Y6H5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.31■■□□□ 1.96
SNCAIPQ9Y6H5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNCAIPQ9Y6H5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 AP001330.3-201ENST00000520123 633 ntBASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 AC104564.3-201ENST00000582367 638 ntBASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.3■■□□□ 1.96
SNCAIPQ9Y6H5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNCAIPQ9Y6H5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.29■■□□□ 1.96
SNCAIPQ9Y6H5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SNCAIPQ9Y6H5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SNCAIPQ9Y6H5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNCAIPQ9Y6H5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNCAIPQ9Y6H5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNCAIPQ9Y6H5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNCAIPQ9Y6H5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNCAIPQ9Y6H5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNCAIPQ9Y6H5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.26■■□□□ 1.95
SNCAIPQ9Y6H5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
SNCAIPQ9Y6H5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNCAIPQ9Y6H5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNCAIPQ9Y6H5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.25■■□□□ 1.95
SNCAIPQ9Y6H5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.25■■□□□ 1.95
SNCAIPQ9Y6H5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 AC005703.6-201ENST00000623265 1329 ntBASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 DUX4L19-201ENST00000557448 1267 ntBASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SNCAIPQ9Y6H5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNCAIPQ9Y6H5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SNCAIPQ9Y6H5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNCAIPQ9Y6H5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNCAIPQ9Y6H5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SNCAIPQ9Y6H5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNCAIPQ9Y6H5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 AC091305.1-201ENST00000479476 895 ntBASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 MIR4767-201ENST00000582827 78 ntBASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.21■■□□□ 1.95
SNCAIPQ9Y6H5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.2■■□□□ 1.95
SNCAIPQ9Y6H5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 MIR6821-201ENST00000617625 74 ntBASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SNCAIPQ9Y6H5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms