Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HCFC2Q9Y5Z7 AC105265.2-201ENST00000467189 838 ntBASIC24.58■■□□□ 1.53
HCFC2Q9Y5Z7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HCFC2Q9Y5Z7 MIR5787-201ENST00000611784 55 ntBASIC24.58■■□□□ 1.53
HCFC2Q9Y5Z7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
HCFC2Q9Y5Z7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
HCFC2Q9Y5Z7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
HCFC2Q9Y5Z7 AC004448.1-201ENST00000458332 883 ntBASIC24.57■■□□□ 1.52
HCFC2Q9Y5Z7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.57■■□□□ 1.52
HCFC2Q9Y5Z7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.57■■□□□ 1.52
HCFC2Q9Y5Z7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.57■■□□□ 1.52
HCFC2Q9Y5Z7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HCFC2Q9Y5Z7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.56■■□□□ 1.52
HCFC2Q9Y5Z7 AF213884.3-201ENST00000563833 479 ntBASIC24.56■■□□□ 1.52
HCFC2Q9Y5Z7 AL136967.2-201ENST00000623968 743 ntBASIC24.56■■□□□ 1.52
HCFC2Q9Y5Z7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
HCFC2Q9Y5Z7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.56■■□□□ 1.52
HCFC2Q9Y5Z7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 AC104564.3-201ENST00000582367 638 ntBASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HCFC2Q9Y5Z7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 ERN1-208ENST00000606895 2068 ntBASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HCFC2Q9Y5Z7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
HCFC2Q9Y5Z7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
HCFC2Q9Y5Z7 MIR939-201ENST00000401314 82 ntBASIC24.53■■□□□ 1.52
HCFC2Q9Y5Z7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HCFC2Q9Y5Z7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.53■■□□□ 1.52
HCFC2Q9Y5Z7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 DUX4L19-201ENST00000557448 1267 ntBASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HCFC2Q9Y5Z7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 AP001330.3-201ENST00000520123 633 ntBASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HCFC2Q9Y5Z7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.5■■□□□ 1.51
HCFC2Q9Y5Z7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.5■■□□□ 1.51
HCFC2Q9Y5Z7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HCFC2Q9Y5Z7 AC005703.6-201ENST00000623265 1329 ntBASIC24.5■■□□□ 1.51
HCFC2Q9Y5Z7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HCFC2Q9Y5Z7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HCFC2Q9Y5Z7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.49■■□□□ 1.51
HCFC2Q9Y5Z7 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.49■■□□□ 1.51
HCFC2Q9Y5Z7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HCFC2Q9Y5Z7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
HCFC2Q9Y5Z7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.48■■□□□ 1.51
HCFC2Q9Y5Z7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 SYT6-210ENST00000641643 1587 ntBASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
HCFC2Q9Y5Z7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 AC091305.1-201ENST00000479476 895 ntBASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HCFC2Q9Y5Z7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HCFC2Q9Y5Z7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HCFC2Q9Y5Z7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HCFC2Q9Y5Z7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HCFC2Q9Y5Z7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HCFC2Q9Y5Z7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms