Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 MIR4466-201ENST00000606121 54 ntBASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NCKAP1Q9Y2A7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NCKAP1Q9Y2A7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 MIR638-201ENST00000385237 100 ntBASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
NCKAP1Q9Y2A7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 AL512631.2-201ENST00000604634 923 ntBASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCKAP1Q9Y2A7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 AC004448.1-201ENST00000458332 883 ntBASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCKAP1Q9Y2A7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCKAP1Q9Y2A7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 AC096631.2-201ENST00000436136 790 ntBASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
NCKAP1Q9Y2A7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.25■■□□□ 1.31
NCKAP1Q9Y2A7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCKAP1Q9Y2A7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCKAP1Q9Y2A7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.24■■□□□ 1.31
NCKAP1Q9Y2A7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.24■■□□□ 1.31
NCKAP1Q9Y2A7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
NCKAP1Q9Y2A7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 DUSP8P4-201ENST00000399538 1761 ntBASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 AC110285.6-201ENST00000617652 491 ntBASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NCKAP1Q9Y2A7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
NCKAP1Q9Y2A7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NCKAP1Q9Y2A7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms