Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 AF213884.3-201ENST00000563833 479 ntBASIC28.36■■■□□ 2.13
MKRN1Q9UHC7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
MKRN1Q9UHC7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
MKRN1Q9UHC7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
MKRN1Q9UHC7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
MKRN1Q9UHC7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
MKRN1Q9UHC7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
MKRN1Q9UHC7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
MKRN1Q9UHC7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.35■■■□□ 2.13
MKRN1Q9UHC7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
MKRN1Q9UHC7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
MKRN1Q9UHC7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
MKRN1Q9UHC7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
MKRN1Q9UHC7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC28.32■■■□□ 2.12
MKRN1Q9UHC7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC28.32■■■□□ 2.12
MKRN1Q9UHC7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
MKRN1Q9UHC7 AC010501.1-201ENST00000606270 1962 ntBASIC28.31■■■□□ 2.12
MKRN1Q9UHC7 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.31■■■□□ 2.12
MKRN1Q9UHC7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
MKRN1Q9UHC7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
MKRN1Q9UHC7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
MKRN1Q9UHC7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
MKRN1Q9UHC7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MKRN1Q9UHC7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MKRN1Q9UHC7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.3■■■□□ 2.12
MKRN1Q9UHC7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MKRN1Q9UHC7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
MKRN1Q9UHC7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
MKRN1Q9UHC7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
MKRN1Q9UHC7 AC092803.2-201ENST00000564287 1899 ntBASIC28.28■■■□□ 2.12
MKRN1Q9UHC7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
MKRN1Q9UHC7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.28■■■□□ 2.12
MKRN1Q9UHC7 IKBKGP1-201ENST00000612193 1073 ntBASIC28.28■■■□□ 2.12
MKRN1Q9UHC7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
MKRN1Q9UHC7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
MKRN1Q9UHC7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
MKRN1Q9UHC7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
MKRN1Q9UHC7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.26■■■□□ 2.11
MKRN1Q9UHC7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.26■■■□□ 2.11
MKRN1Q9UHC7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
MKRN1Q9UHC7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 MIR939-201ENST00000401314 82 ntBASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
MKRN1Q9UHC7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.24■■■□□ 2.11
MKRN1Q9UHC7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC28.24■■■□□ 2.11
MKRN1Q9UHC7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
MKRN1Q9UHC7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
MKRN1Q9UHC7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
MKRN1Q9UHC7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
MKRN1Q9UHC7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
MKRN1Q9UHC7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
MKRN1Q9UHC7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
MKRN1Q9UHC7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
MKRN1Q9UHC7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.22■■■□□ 2.11
MKRN1Q9UHC7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms