Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 GPX1-201ENST00000419349 1106 ntBASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CPSF2Q9P2I0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 MIR4449-201ENST00000578365 66 ntBASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CPSF2Q9P2I0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 AC004812.2-201ENST00000611079 2094 ntBASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CPSF2Q9P2I0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPSF2Q9P2I0 MIR6089-201ENST00000616698 64 ntBASIC23.17■■□□□ 1.3
CPSF2Q9P2I0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
CPSF2Q9P2I0 AC141586.4-201ENST00000624558 1573 ntBASIC23.17■■□□□ 1.3
CPSF2Q9P2I0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CPSF2Q9P2I0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CPSF2Q9P2I0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CPSF2Q9P2I0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CPSF2Q9P2I0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.14■■□□□ 1.29
CPSF2Q9P2I0 RAP2CP1-202ENST00000605179 643 ntBASIC23.14■■□□□ 1.29
CPSF2Q9P2I0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPSF2Q9P2I0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPSF2Q9P2I0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CPSF2Q9P2I0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.14■■□□□ 1.29
CPSF2Q9P2I0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CPSF2Q9P2I0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPSF2Q9P2I0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPSF2Q9P2I0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CPSF2Q9P2I0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CPSF2Q9P2I0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 AC026202.3-201ENST00000600805 1127 ntBASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
CPSF2Q9P2I0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CPSF2Q9P2I0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPSF2Q9P2I0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPSF2Q9P2I0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.09■■□□□ 1.29
CPSF2Q9P2I0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CPSF2Q9P2I0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms