Protein–RNA interactions for Protein: Q9HB40

SCPEP1, Retinoid-inducible serine carboxypeptidase, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCPEP1Q9HB40 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCPEP1Q9HB40 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCPEP1Q9HB40 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCPEP1Q9HB40 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCPEP1Q9HB40 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCPEP1Q9HB40 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCPEP1Q9HB40 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCPEP1Q9HB40 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 DUX4L11-201ENST00000611504 1267 ntBASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 DUX4L12-201ENST00000614593 1267 ntBASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 DUX4L14-201ENST00000621227 1267 ntBASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCPEP1Q9HB40 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCPEP1Q9HB40 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.71■□□□□ 0.75
SCPEP1Q9HB40 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCPEP1Q9HB40 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCPEP1Q9HB40 SLC25A24-204ENST00000569674 2357 ntBASIC19.7■□□□□ 0.74
SCPEP1Q9HB40 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms