Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MAP1LC3AQ9H492 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.89■□□□□ 0.3
MAP1LC3AQ9H492 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MAP1LC3AQ9H492 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MAP1LC3AQ9H492 AC233723.2-201ENST00000623798 2106 ntBASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MAP1LC3AQ9H492 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.88■□□□□ 0.29
MAP1LC3AQ9H492 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MAP1LC3AQ9H492 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 AL359504.2-201ENST00000605506 1601 ntBASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MAP1LC3AQ9H492 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MAP1LC3AQ9H492 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 LINC00565-201ENST00000562710 2331 ntBASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 MIR6089-201ENST00000616698 64 ntBASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MAP1LC3AQ9H492 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 DUX4L28-201ENST00000623687 678 ntBASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MAP1LC3AQ9H492 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MAP1LC3AQ9H492 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MAP1LC3AQ9H492 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.81■□□□□ 0.28
MAP1LC3AQ9H492 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MAP1LC3AQ9H492 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MAP1LC3AQ9H492 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MAP1LC3AQ9H492 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms