Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 AC097639.1-201ENST00000565519 1891 ntBASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 KRT18P10-201ENST00000388836 1287 ntBASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF4Q9BUZ4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 AC022211.4-201ENST00000625094 2161 ntBASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF4Q9BUZ4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF4Q9BUZ4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF4Q9BUZ4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 GUSBP5-201ENST00000418136 578 ntBASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF4Q9BUZ4 AC142472.1-201ENST00000612013 1741 ntBASIC20.58■□□□□ 0.89
TRAF4Q9BUZ4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF4Q9BUZ4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TRAF4Q9BUZ4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRAF4Q9BUZ4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRAF4Q9BUZ4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF4Q9BUZ4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF4Q9BUZ4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF4Q9BUZ4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF4Q9BUZ4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRAF4Q9BUZ4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAF4Q9BUZ4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF4Q9BUZ4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF4Q9BUZ4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF4Q9BUZ4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.55■□□□□ 0.88
TRAF4Q9BUZ4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF4Q9BUZ4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAF4Q9BUZ4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 AL024507.2-201ENST00000606070 2574 ntBASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRAF4Q9BUZ4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF4Q9BUZ4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAF4Q9BUZ4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
TRAF4Q9BUZ4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAF4Q9BUZ4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.52■□□□□ 0.88
TRAF4Q9BUZ4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms