Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF170Q96K19 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF170Q96K19 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF170Q96K19 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF170Q96K19 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RNF170Q96K19 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF170Q96K19 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF170Q96K19 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF170Q96K19 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF170Q96K19 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RNF170Q96K19 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF170Q96K19 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
RNF170Q96K19 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF170Q96K19 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF170Q96K19 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF170Q96K19 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF170Q96K19 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF170Q96K19 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF170Q96K19 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF170Q96K19 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.44■□□□□ 0.86
RNF170Q96K19 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF170Q96K19 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF170Q96K19 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RNF170Q96K19 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF170Q96K19 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF170Q96K19 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF170Q96K19 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF170Q96K19 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RNF170Q96K19 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 AC026202.3-201ENST00000600805 1127 ntBASIC20.42■□□□□ 0.86
RNF170Q96K19 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF170Q96K19 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF170Q96K19 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF170Q96K19 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
RNF170Q96K19 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF170Q96K19 C9orf163-202ENST00000624034 2573 ntBASIC20.41■□□□□ 0.86
RNF170Q96K19 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF170Q96K19 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF170Q96K19 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF170Q96K19 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF170Q96K19 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RNF170Q96K19 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.41■□□□□ 0.86
RNF170Q96K19 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF170Q96K19 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF170Q96K19 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF170Q96K19 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF170Q96K19 SLC25A24-204ENST00000569674 2357 ntBASIC20.4■□□□□ 0.86
RNF170Q96K19 RAP2CP1-202ENST00000605179 643 ntBASIC20.4■□□□□ 0.86
RNF170Q96K19 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF170Q96K19 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RNF170Q96K19 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF170Q96K19 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF170Q96K19 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF170Q96K19 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF170Q96K19 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF170Q96K19 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF170Q96K19 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF170Q96K19 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF170Q96K19 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF170Q96K19 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF170Q96K19 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF170Q96K19 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF170Q96K19 AC133552.2-201ENST00000619106 1032 ntBASIC20.38■□□□□ 0.85
RNF170Q96K19 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms