Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RNF138Q8WVD3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF138Q8WVD3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF138Q8WVD3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF138Q8WVD3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF138Q8WVD3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF138Q8WVD3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF138Q8WVD3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF138Q8WVD3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF138Q8WVD3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF138Q8WVD3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF138Q8WVD3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF138Q8WVD3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF138Q8WVD3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.17■□□□□ 0.98
RNF138Q8WVD3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 AC131274.2-201ENST00000580697 1507 ntBASIC21.17■□□□□ 0.98
RNF138Q8WVD3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF138Q8WVD3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 AL161729.1-201ENST00000604104 1402 ntBASIC21.16■□□□□ 0.98
RNF138Q8WVD3 AC239859.2-201ENST00000444165 318 ntBASIC21.16■□□□□ 0.98
RNF138Q8WVD3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF138Q8WVD3 AL139125.2-201ENST00000623134 1869 ntBASIC21.15■□□□□ 0.98
RNF138Q8WVD3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF138Q8WVD3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF138Q8WVD3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF138Q8WVD3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF138Q8WVD3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF138Q8WVD3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF138Q8WVD3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF138Q8WVD3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
RNF138Q8WVD3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF138Q8WVD3 KRT125P-201ENST00000546827 989 ntBASIC21.14■□□□□ 0.97
RNF138Q8WVD3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.14■□□□□ 0.97
RNF138Q8WVD3 MIR4787-201ENST00000607364 84 ntBASIC21.14■□□□□ 0.97
RNF138Q8WVD3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF138Q8WVD3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF138Q8WVD3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RNF138Q8WVD3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF138Q8WVD3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF138Q8WVD3 GUSBP5-201ENST00000418136 578 ntBASIC21.13■□□□□ 0.97
RNF138Q8WVD3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF138Q8WVD3 SNX5-217ENST00000606557 1087 ntBASIC21.13■□□□□ 0.97
RNF138Q8WVD3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF138Q8WVD3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 AC004448.1-201ENST00000458332 883 ntBASIC21.12■□□□□ 0.97
RNF138Q8WVD3 AC092028.1-203ENST00000608262 953 ntBASIC21.12■□□□□ 0.97
RNF138Q8WVD3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF138Q8WVD3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF138Q8WVD3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 AC141586.4-201ENST00000624558 1573 ntBASIC21.1■□□□□ 0.97
RNF138Q8WVD3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms