Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.93■□□□□ 0.78
BEST4Q8NFU0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.93■□□□□ 0.78
BEST4Q8NFU0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST4Q8NFU0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BEST4Q8NFU0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BEST4Q8NFU0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
BEST4Q8NFU0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BEST4Q8NFU0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST4Q8NFU0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BEST4Q8NFU0 AC126177.7-201ENST00000547904 679 ntBASIC19.91■□□□□ 0.78
BEST4Q8NFU0 AL024507.2-201ENST00000606070 2574 ntBASIC19.91■□□□□ 0.78
BEST4Q8NFU0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST4Q8NFU0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.91■□□□□ 0.78
BEST4Q8NFU0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 AC233723.2-201ENST00000623798 2106 ntBASIC19.9■□□□□ 0.78
BEST4Q8NFU0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BEST4Q8NFU0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BEST4Q8NFU0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST4Q8NFU0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
BEST4Q8NFU0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.86■□□□□ 0.77
BEST4Q8NFU0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
BEST4Q8NFU0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST4Q8NFU0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BEST4Q8NFU0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
BEST4Q8NFU0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
BEST4Q8NFU0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BEST4Q8NFU0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.83■□□□□ 0.77
BEST4Q8NFU0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BEST4Q8NFU0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms