Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
NUP43Q8NFH3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUP43Q8NFH3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUP43Q8NFH3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.7■■□□□ 1.06
NUP43Q8NFH3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NUP43Q8NFH3 AC022616.5-201ENST00000518796 181 ntBASIC21.7■■□□□ 1.06
NUP43Q8NFH3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUP43Q8NFH3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 AL033527.3-201ENST00000566366 1196 ntBASIC21.69■■□□□ 1.06
NUP43Q8NFH3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NUP43Q8NFH3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 AC010980.1-201ENST00000587192 1142 ntBASIC21.68■■□□□ 1.06
NUP43Q8NFH3 PVT1_1.1-201ENST00000615125 194 ntBASIC21.68■■□□□ 1.06
NUP43Q8NFH3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NUP43Q8NFH3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 AC004812.2-201ENST00000611079 2094 ntBASIC21.67■■□□□ 1.06
NUP43Q8NFH3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.67■■□□□ 1.06
NUP43Q8NFH3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 AC011551.1-201ENST00000614101 683 ntBASIC21.66■■□□□ 1.06
NUP43Q8NFH3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NUP43Q8NFH3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
NUP43Q8NFH3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NUP43Q8NFH3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NUP43Q8NFH3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.64■■□□□ 1.06
NUP43Q8NFH3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NUP43Q8NFH3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUP43Q8NFH3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.64■■□□□ 1.05
NUP43Q8NFH3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NUP43Q8NFH3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUP43Q8NFH3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUP43Q8NFH3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUP43Q8NFH3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NUP43Q8NFH3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NUP43Q8NFH3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms