Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF1Q8ND25 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF1Q8ND25 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF1Q8ND25 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF1Q8ND25 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNRF1Q8ND25 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 RARRES2P1-201ENST00000474487 481 ntBASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNRF1Q8ND25 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNRF1Q8ND25 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.39■□□□□ 0.7
ZNRF1Q8ND25 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNRF1Q8ND25 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNRF1Q8ND25 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNRF1Q8ND25 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNRF1Q8ND25 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNRF1Q8ND25 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNRF1Q8ND25 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNRF1Q8ND25 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNRF1Q8ND25 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNRF1Q8ND25 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNRF1Q8ND25 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 AL031848.2-201ENST00000607670 837 ntBASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNRF1Q8ND25 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 MIR4281-201ENST00000580852 62 ntBASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNRF1Q8ND25 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNRF1Q8ND25 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNRF1Q8ND25 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNRF1Q8ND25 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNRF1Q8ND25 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNRF1Q8ND25 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNRF1Q8ND25 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNRF1Q8ND25 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNRF1Q8ND25 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
ZNRF1Q8ND25 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 AC093323.1-202ENST00000635031 2045 ntBASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 LINC00543-201ENST00000567234 1845 ntBASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNRF1Q8ND25 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
ZNRF1Q8ND25 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNRF1Q8ND25 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms