Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 RPS2P7-201ENST00000447334 885 ntBASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TRIML1Q8N9V2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIML1Q8N9V2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.87■■□□□ 1.73
TRIML1Q8N9V2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIML1Q8N9V2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRIML1Q8N9V2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TRIML1Q8N9V2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.85■■□□□ 1.73
TRIML1Q8N9V2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.84■■□□□ 1.73
TRIML1Q8N9V2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TRIML1Q8N9V2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.84■■□□□ 1.73
TRIML1Q8N9V2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIML1Q8N9V2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.84■■□□□ 1.73
TRIML1Q8N9V2 AC068473.5-201ENST00000616428 2072 ntBASIC25.84■■□□□ 1.73
TRIML1Q8N9V2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.83■■□□□ 1.73
TRIML1Q8N9V2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRIML1Q8N9V2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRIML1Q8N9V2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TRIML1Q8N9V2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.83■■□□□ 1.72
TRIML1Q8N9V2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 AC018755.3-202ENST00000596210 929 ntBASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
TRIML1Q8N9V2 AC090877.2-201ENST00000558441 1738 ntBASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
TRIML1Q8N9V2 AC133561.1-201ENST00000568600 2415 ntBASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 AL592293.1-201ENST00000502889 1188 ntBASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
TRIML1Q8N9V2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 SPCS2P3-201ENST00000500401 656 ntBASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 AC087393.1-201ENST00000582896 145 ntBASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.79■■□□□ 1.72
TRIML1Q8N9V2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRIML1Q8N9V2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TRIML1Q8N9V2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.78■■□□□ 1.72
TRIML1Q8N9V2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TRIML1Q8N9V2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.78■■□□□ 1.72
TRIML1Q8N9V2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.78■■□□□ 1.72
TRIML1Q8N9V2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRIML1Q8N9V2 AL592295.1-201ENST00000400984 884 ntBASIC25.77■■□□□ 1.72
TRIML1Q8N9V2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.77■■□□□ 1.72
TRIML1Q8N9V2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.77■■□□□ 1.72
TRIML1Q8N9V2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRIML1Q8N9V2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
TRIML1Q8N9V2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRIML1Q8N9V2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
TRIML1Q8N9V2 AL161729.1-201ENST00000604104 1402 ntBASIC25.76■■□□□ 1.71
TRIML1Q8N9V2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.76■■□□□ 1.71
TRIML1Q8N9V2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms