Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.75■■□□□ 1.55
TTC39CQ8N584 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TTC39CQ8N584 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
TTC39CQ8N584 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TTC39CQ8N584 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.75■■□□□ 1.55
TTC39CQ8N584 AF131216.4-201ENST00000638924 1588 ntBASIC24.75■■□□□ 1.55
TTC39CQ8N584 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.75■■□□□ 1.55
TTC39CQ8N584 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.74■■□□□ 1.55
TTC39CQ8N584 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.74■■□□□ 1.55
TTC39CQ8N584 AL451085.2-201ENST00000605085 799 ntBASIC24.74■■□□□ 1.55
TTC39CQ8N584 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
TTC39CQ8N584 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TTC39CQ8N584 AC141586.4-201ENST00000624558 1573 ntBASIC24.74■■□□□ 1.55
TTC39CQ8N584 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TTC39CQ8N584 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TTC39CQ8N584 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TTC39CQ8N584 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.73■■□□□ 1.55
TTC39CQ8N584 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.73■■□□□ 1.55
TTC39CQ8N584 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TTC39CQ8N584 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TTC39CQ8N584 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TTC39CQ8N584 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
TTC39CQ8N584 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TTC39CQ8N584 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.72■■□□□ 1.55
TTC39CQ8N584 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.72■■□□□ 1.55
TTC39CQ8N584 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TTC39CQ8N584 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC39CQ8N584 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.71■■□□□ 1.55
TTC39CQ8N584 AC009299.2-201ENST00000482477 511 ntBASIC24.71■■□□□ 1.55
TTC39CQ8N584 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC39CQ8N584 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
TTC39CQ8N584 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
TTC39CQ8N584 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC39CQ8N584 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC39CQ8N584 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC39CQ8N584 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TTC39CQ8N584 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.7■■□□□ 1.55
TTC39CQ8N584 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
TTC39CQ8N584 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TTC39CQ8N584 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TTC39CQ8N584 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TTC39CQ8N584 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TTC39CQ8N584 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.7■■□□□ 1.54
TTC39CQ8N584 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.7■■□□□ 1.54
TTC39CQ8N584 AL139125.2-201ENST00000623134 1869 ntBASIC24.7■■□□□ 1.54
TTC39CQ8N584 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
TTC39CQ8N584 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.7■■□□□ 1.54
TTC39CQ8N584 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.69■■□□□ 1.54
TTC39CQ8N584 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39CQ8N584 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39CQ8N584 AL022069.1-201ENST00000568025 1636 ntBASIC24.69■■□□□ 1.54
TTC39CQ8N584 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39CQ8N584 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39CQ8N584 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC39CQ8N584 AC021242.3-201ENST00000607598 1377 ntBASIC24.68■■□□□ 1.54
TTC39CQ8N584 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39CQ8N584 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39CQ8N584 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.68■■□□□ 1.54
TTC39CQ8N584 KRT125P-201ENST00000546827 989 ntBASIC24.68■■□□□ 1.54
TTC39CQ8N584 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC39CQ8N584 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
TTC39CQ8N584 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC39CQ8N584 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TTC39CQ8N584 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39CQ8N584 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39CQ8N584 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39CQ8N584 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.67■■□□□ 1.54
TTC39CQ8N584 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.67■■□□□ 1.54
TTC39CQ8N584 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.67■■□□□ 1.54
TTC39CQ8N584 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TTC39CQ8N584 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC39CQ8N584 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39CQ8N584 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC39CQ8N584 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.66■■□□□ 1.54
TTC39CQ8N584 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.66■■□□□ 1.54
TTC39CQ8N584 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
TTC39CQ8N584 LINC00543-201ENST00000567234 1845 ntBASIC24.65■■□□□ 1.54
TTC39CQ8N584 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39CQ8N584 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39CQ8N584 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC39CQ8N584 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
TTC39CQ8N584 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.65■■□□□ 1.54
TTC39CQ8N584 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TTC39CQ8N584 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.64■■□□□ 1.54
TTC39CQ8N584 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.64■■□□□ 1.54
TTC39CQ8N584 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.64■■□□□ 1.54
TTC39CQ8N584 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.64■■□□□ 1.54
TTC39CQ8N584 AL035685.1-201ENST00000636663 812 ntBASIC24.64■■□□□ 1.54
TTC39CQ8N584 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TTC39CQ8N584 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TTC39CQ8N584 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.64■■□□□ 1.53
TTC39CQ8N584 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TTC39CQ8N584 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TTC39CQ8N584 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TTC39CQ8N584 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TTC39CQ8N584 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
TTC39CQ8N584 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
TTC39CQ8N584 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.63■■□□□ 1.53
TTC39CQ8N584 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.63■■□□□ 1.53
TTC39CQ8N584 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms