Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 MIR638-201ENST00000385237 100 ntBASIC23.71■■□□□ 1.39
CHPFQ8IZ52 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CHPFQ8IZ52 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
CHPFQ8IZ52 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.7■■□□□ 1.38
CHPFQ8IZ52 SNX5-217ENST00000606557 1087 ntBASIC23.7■■□□□ 1.38
CHPFQ8IZ52 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CHPFQ8IZ52 AC092803.2-201ENST00000564287 1899 ntBASIC23.7■■□□□ 1.38
CHPFQ8IZ52 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.7■■□□□ 1.38
CHPFQ8IZ52 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 MIR4466-201ENST00000606121 54 ntBASIC23.69■■□□□ 1.38
CHPFQ8IZ52 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.69■■□□□ 1.38
CHPFQ8IZ52 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHPFQ8IZ52 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHPFQ8IZ52 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.68■■□□□ 1.38
CHPFQ8IZ52 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CHPFQ8IZ52 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHPFQ8IZ52 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.68■■□□□ 1.38
CHPFQ8IZ52 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CHPFQ8IZ52 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.66■■□□□ 1.38
CHPFQ8IZ52 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.66■■□□□ 1.38
CHPFQ8IZ52 MIR6722-201ENST00000617286 78 ntBASIC23.66■■□□□ 1.38
CHPFQ8IZ52 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.66■■□□□ 1.38
CHPFQ8IZ52 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHPFQ8IZ52 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.65■■□□□ 1.38
CHPFQ8IZ52 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHPFQ8IZ52 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.65■■□□□ 1.38
CHPFQ8IZ52 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CHPFQ8IZ52 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHPFQ8IZ52 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.64■■□□□ 1.38
CHPFQ8IZ52 AC096631.2-201ENST00000436136 790 ntBASIC23.64■■□□□ 1.37
CHPFQ8IZ52 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.64■■□□□ 1.37
CHPFQ8IZ52 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.64■■□□□ 1.37
CHPFQ8IZ52 AL512631.2-201ENST00000604634 923 ntBASIC23.64■■□□□ 1.37
CHPFQ8IZ52 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.64■■□□□ 1.37
CHPFQ8IZ52 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHPFQ8IZ52 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHPFQ8IZ52 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHPFQ8IZ52 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHPFQ8IZ52 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHPFQ8IZ52 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHPFQ8IZ52 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHPFQ8IZ52 MIR935-201ENST00000401179 91 ntBASIC23.63■■□□□ 1.37
CHPFQ8IZ52 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHPFQ8IZ52 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 AC110285.6-201ENST00000617652 491 ntBASIC23.62■■□□□ 1.37
CHPFQ8IZ52 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHPFQ8IZ52 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHPFQ8IZ52 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHPFQ8IZ52 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.61■■□□□ 1.37
CHPFQ8IZ52 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.61■■□□□ 1.37
CHPFQ8IZ52 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHPFQ8IZ52 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHPFQ8IZ52 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.61■■□□□ 1.37
CHPFQ8IZ52 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CHPFQ8IZ52 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.6■■□□□ 1.37
CHPFQ8IZ52 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.6■■□□□ 1.37
CHPFQ8IZ52 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.6■■□□□ 1.37
CHPFQ8IZ52 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHPFQ8IZ52 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.59■■□□□ 1.37
CHPFQ8IZ52 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CHPFQ8IZ52 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHPFQ8IZ52 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHPFQ8IZ52 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CHPFQ8IZ52 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.58■■□□□ 1.37
CHPFQ8IZ52 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHPFQ8IZ52 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CHPFQ8IZ52 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHPFQ8IZ52 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.58■■□□□ 1.36
CHPFQ8IZ52 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHPFQ8IZ52 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.57■■□□□ 1.36
CHPFQ8IZ52 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.57■■□□□ 1.36
CHPFQ8IZ52 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHPFQ8IZ52 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHPFQ8IZ52 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms