Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00346Q8IVM7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00346Q8IVM7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.48■□□□□ 0.87
LINC00346Q8IVM7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00346Q8IVM7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00346Q8IVM7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00346Q8IVM7 DUX4L18-201ENST00000553347 1267 ntBASIC20.48■□□□□ 0.87
LINC00346Q8IVM7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00346Q8IVM7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00346Q8IVM7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 AL592295.1-201ENST00000400984 884 ntBASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 NTF6A-201ENST00000591175 560 ntBASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
LINC00346Q8IVM7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00346Q8IVM7 AC090877.2-201ENST00000558441 1738 ntBASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LINC00346Q8IVM7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 LONRF2P2-201ENST00000439212 571 ntBASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00346Q8IVM7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.42■□□□□ 0.86
LINC00346Q8IVM7 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.42■□□□□ 0.86
LINC00346Q8IVM7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LINC00346Q8IVM7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 AC139795.1-202ENST00000500444 432 ntBASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00346Q8IVM7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.4■□□□□ 0.86
LINC00346Q8IVM7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.39■□□□□ 0.86
LINC00346Q8IVM7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00346Q8IVM7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LINC00346Q8IVM7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00346Q8IVM7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00346Q8IVM7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms