Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
VPS36Q86VN1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.89■■□□□ 1.58
VPS36Q86VN1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS36Q86VN1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS36Q86VN1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS36Q86VN1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS36Q86VN1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.89■■□□□ 1.58
VPS36Q86VN1 RPS2P7-201ENST00000447334 885 ntBASIC24.89■■□□□ 1.58
VPS36Q86VN1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS36Q86VN1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
VPS36Q86VN1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS36Q86VN1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
VPS36Q86VN1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS36Q86VN1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS36Q86VN1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
VPS36Q86VN1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
VPS36Q86VN1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.88■■□□□ 1.57
VPS36Q86VN1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS36Q86VN1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS36Q86VN1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
VPS36Q86VN1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
VPS36Q86VN1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.88■■□□□ 1.57
VPS36Q86VN1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS36Q86VN1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS36Q86VN1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
VPS36Q86VN1 ABCB10P4-201ENST00000566803 2184 ntBASIC24.87■■□□□ 1.57
VPS36Q86VN1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
VPS36Q86VN1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.87■■□□□ 1.57
VPS36Q86VN1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
VPS36Q86VN1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
VPS36Q86VN1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS36Q86VN1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS36Q86VN1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
VPS36Q86VN1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS36Q86VN1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS36Q86VN1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.86■■□□□ 1.57
VPS36Q86VN1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS36Q86VN1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS36Q86VN1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VPS36Q86VN1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.85■■□□□ 1.57
VPS36Q86VN1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
VPS36Q86VN1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS36Q86VN1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS36Q86VN1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
VPS36Q86VN1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS36Q86VN1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS36Q86VN1 AL592293.1-201ENST00000502889 1188 ntBASIC24.84■■□□□ 1.57
VPS36Q86VN1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
VPS36Q86VN1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS36Q86VN1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
VPS36Q86VN1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.83■■□□□ 1.57
VPS36Q86VN1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS36Q86VN1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
VPS36Q86VN1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
VPS36Q86VN1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.83■■□□□ 1.56
VPS36Q86VN1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VPS36Q86VN1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
VPS36Q86VN1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
VPS36Q86VN1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VPS36Q86VN1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS36Q86VN1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.81■■□□□ 1.56
VPS36Q86VN1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
VPS36Q86VN1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
VPS36Q86VN1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
VPS36Q86VN1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
VPS36Q86VN1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
VPS36Q86VN1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS36Q86VN1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VPS36Q86VN1 NTF6A-201ENST00000591175 560 ntBASIC24.8■■□□□ 1.56
VPS36Q86VN1 MIR6765-201ENST00000614092 87 ntBASIC24.8■■□□□ 1.56
VPS36Q86VN1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS36Q86VN1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
VPS36Q86VN1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS36Q86VN1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
VPS36Q86VN1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
VPS36Q86VN1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 AL592295.1-201ENST00000400984 884 ntBASIC24.79■■□□□ 1.56
VPS36Q86VN1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 AC087393.1-201ENST00000582896 145 ntBASIC24.79■■□□□ 1.56
VPS36Q86VN1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS36Q86VN1 AC090877.2-201ENST00000558441 1738 ntBASIC24.78■■□□□ 1.56
VPS36Q86VN1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS36Q86VN1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS36Q86VN1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.78■■□□□ 1.56
VPS36Q86VN1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS36Q86VN1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS36Q86VN1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS36Q86VN1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
VPS36Q86VN1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS36Q86VN1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms