Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.19■■□□□ 1.3
LDB1Q86U70 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LDB1Q86U70 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.18■■□□□ 1.3
LDB1Q86U70 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
LDB1Q86U70 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.18■■□□□ 1.3
LDB1Q86U70 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LDB1Q86U70 AC004812.2-201ENST00000611079 2094 ntBASIC23.18■■□□□ 1.3
LDB1Q86U70 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LDB1Q86U70 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
LDB1Q86U70 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.17■■□□□ 1.3
LDB1Q86U70 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.17■■□□□ 1.3
LDB1Q86U70 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.17■■□□□ 1.3
LDB1Q86U70 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LDB1Q86U70 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.17■■□□□ 1.3
LDB1Q86U70 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.16■■□□□ 1.3
LDB1Q86U70 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LDB1Q86U70 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.16■■□□□ 1.3
LDB1Q86U70 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
LDB1Q86U70 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.15■■□□□ 1.3
LDB1Q86U70 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LDB1Q86U70 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
LDB1Q86U70 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.15■■□□□ 1.3
LDB1Q86U70 AC019171.1-201ENST00000601251 1056 ntBASIC23.15■■□□□ 1.3
LDB1Q86U70 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LDB1Q86U70 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
LDB1Q86U70 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
LDB1Q86U70 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LDB1Q86U70 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LDB1Q86U70 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.14■■□□□ 1.29
LDB1Q86U70 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LDB1Q86U70 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.14■■□□□ 1.29
LDB1Q86U70 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.14■■□□□ 1.29
LDB1Q86U70 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LDB1Q86U70 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LDB1Q86U70 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LDB1Q86U70 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LDB1Q86U70 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.13■■□□□ 1.29
LDB1Q86U70 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.13■■□□□ 1.29
LDB1Q86U70 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LDB1Q86U70 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LDB1Q86U70 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LDB1Q86U70 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
LDB1Q86U70 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LDB1Q86U70 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LDB1Q86U70 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LDB1Q86U70 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.12■■□□□ 1.29
LDB1Q86U70 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.12■■□□□ 1.29
LDB1Q86U70 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
LDB1Q86U70 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LDB1Q86U70 ABCB10P4-201ENST00000566803 2184 ntBASIC23.11■■□□□ 1.29
LDB1Q86U70 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LDB1Q86U70 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
LDB1Q86U70 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LDB1Q86U70 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
LDB1Q86U70 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LDB1Q86U70 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.11■■□□□ 1.29
LDB1Q86U70 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LDB1Q86U70 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LDB1Q86U70 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LDB1Q86U70 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LDB1Q86U70 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LDB1Q86U70 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.1■■□□□ 1.29
LDB1Q86U70 AC074183.2-201ENST00000623112 922 ntBASIC23.1■■□□□ 1.29
LDB1Q86U70 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.1■■□□□ 1.29
LDB1Q86U70 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LDB1Q86U70 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.1■■□□□ 1.29
LDB1Q86U70 AC141586.4-201ENST00000624558 1573 ntBASIC23.1■■□□□ 1.29
LDB1Q86U70 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LDB1Q86U70 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
LDB1Q86U70 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
LDB1Q86U70 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LDB1Q86U70 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
LDB1Q86U70 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LDB1Q86U70 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LDB1Q86U70 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.08■■□□□ 1.29
LDB1Q86U70 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.08■■□□□ 1.29
LDB1Q86U70 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LDB1Q86U70 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.08■■□□□ 1.29
LDB1Q86U70 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.08■■□□□ 1.29
LDB1Q86U70 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
LDB1Q86U70 KRT8P33-201ENST00000508125 1423 ntBASIC23.08■■□□□ 1.28
LDB1Q86U70 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
LDB1Q86U70 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms