Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 AC024257.2-201ENST00000549699 147 ntBASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPNS3Q6ZMD2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPNS3Q6ZMD2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPNS3Q6ZMD2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPNS3Q6ZMD2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 MIR939-201ENST00000401314 82 ntBASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 AF213884.3-201ENST00000563833 479 ntBASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPNS3Q6ZMD2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SPNS3Q6ZMD2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPNS3Q6ZMD2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SPNS3Q6ZMD2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SPNS3Q6ZMD2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SPNS3Q6ZMD2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPNS3Q6ZMD2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 AC091305.1-201ENST00000479476 895 ntBASIC20■□□□□ 0.79
SPNS3Q6ZMD2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20■□□□□ 0.79
SPNS3Q6ZMD2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 AC011551.1-201ENST00000614101 683 ntBASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.99■□□□□ 0.79
SPNS3Q6ZMD2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPNS3Q6ZMD2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SPNS3Q6ZMD2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPNS3Q6ZMD2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.98■□□□□ 0.79
SPNS3Q6ZMD2 LINC01003-201ENST00000564834 1764 ntBASIC19.98■□□□□ 0.79
SPNS3Q6ZMD2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPNS3Q6ZMD2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.97■□□□□ 0.79
SPNS3Q6ZMD2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPNS3Q6ZMD2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SPNS3Q6ZMD2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.96■□□□□ 0.79
SPNS3Q6ZMD2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms