Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
NHLRC1Q6VVB1 AC090877.2-201ENST00000558441 1738 ntBASIC20.83■□□□□ 0.92
NHLRC1Q6VVB1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 AC133561.1-201ENST00000568600 2415 ntBASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 AC139795.1-202ENST00000500444 432 ntBASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
NHLRC1Q6VVB1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NHLRC1Q6VVB1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 HLA-L-211ENST00000482052 1765 ntBASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
NHLRC1Q6VVB1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 LINC00543-201ENST00000567234 1845 ntBASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 AC022616.5-201ENST00000518796 181 ntBASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NHLRC1Q6VVB1 LINC01124-201ENST00000409786 2117 ntBASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 AC010980.1-201ENST00000587192 1142 ntBASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NHLRC1Q6VVB1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 BHLHE23-202ENST00000612929 1109 ntBASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NHLRC1Q6VVB1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NHLRC1Q6VVB1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NHLRC1Q6VVB1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 AC103834.1-201ENST00000520383 144 ntBASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NHLRC1Q6VVB1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NHLRC1Q6VVB1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms