Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
THBS3P49746 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
THBS3P49746 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS3P49746 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS3P49746 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
THBS3P49746 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.05■□□□□ 0.64
THBS3P49746 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
THBS3P49746 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
THBS3P49746 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS3P49746 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS3P49746 AL592293.1-201ENST00000502889 1188 ntBASIC19.05■□□□□ 0.64
THBS3P49746 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS3P49746 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.05■□□□□ 0.64
THBS3P49746 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
THBS3P49746 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
THBS3P49746 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.04■□□□□ 0.64
THBS3P49746 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.04■□□□□ 0.64
THBS3P49746 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
THBS3P49746 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.04■□□□□ 0.64
THBS3P49746 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
THBS3P49746 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.04■□□□□ 0.64
THBS3P49746 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
THBS3P49746 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THBS3P49746 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.03■□□□□ 0.64
THBS3P49746 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
THBS3P49746 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.03■□□□□ 0.64
THBS3P49746 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS3P49746 AC129492.7-201ENST00000622992 756 ntBASIC19.03■□□□□ 0.64
THBS3P49746 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS3P49746 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
THBS3P49746 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
THBS3P49746 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.02■□□□□ 0.64
THBS3P49746 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 AC018755.3-202ENST00000596210 929 ntBASIC19.02■□□□□ 0.64
THBS3P49746 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
THBS3P49746 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
THBS3P49746 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.02■□□□□ 0.64
THBS3P49746 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.02■□□□□ 0.63
THBS3P49746 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
THBS3P49746 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS3P49746 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS3P49746 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.01■□□□□ 0.63
THBS3P49746 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
THBS3P49746 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS3P49746 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
THBS3P49746 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19■□□□□ 0.63
THBS3P49746 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19■□□□□ 0.63
THBS3P49746 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19■□□□□ 0.63
THBS3P49746 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
THBS3P49746 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
THBS3P49746 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS3P49746 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
THBS3P49746 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS3P49746 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
THBS3P49746 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.99■□□□□ 0.63
THBS3P49746 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
THBS3P49746 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS3P49746 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
THBS3P49746 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.99■□□□□ 0.63
THBS3P49746 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS3P49746 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.98■□□□□ 0.63
THBS3P49746 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
THBS3P49746 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
THBS3P49746 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
THBS3P49746 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
THBS3P49746 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
THBS3P49746 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
THBS3P49746 RPS2P7-201ENST00000447334 885 ntBASIC18.98■□□□□ 0.63
THBS3P49746 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.98■□□□□ 0.63
THBS3P49746 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
THBS3P49746 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
THBS3P49746 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
THBS3P49746 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
THBS3P49746 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
THBS3P49746 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
THBS3P49746 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.97■□□□□ 0.63
THBS3P49746 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
THBS3P49746 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms