Protein–RNA interactions for Protein: P43487

RANBP1, Ran-specific GTPase-activating protein, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1P43487 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP1P43487 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP1P43487 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP1P43487 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RANBP1P43487 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RANBP1P43487 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RANBP1P43487 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.18■□□□□ 0.98
RANBP1P43487 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
RANBP1P43487 MIR6090-201ENST00000622481 60 ntBASIC21.18■□□□□ 0.98
RANBP1P43487 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RANBP1P43487 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RANBP1P43487 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.17■□□□□ 0.98
RANBP1P43487 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
RANBP1P43487 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RANBP1P43487 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 MIR3665-201ENST00000578708 105 ntBASIC21.17■□□□□ 0.98
RANBP1P43487 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RANBP1P43487 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 WHAMMP3-201ENST00000611636 1609 ntBASIC21.17■□□□□ 0.98
RANBP1P43487 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RANBP1P43487 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.17■□□□□ 0.98
RANBP1P43487 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.17■□□□□ 0.98
RANBP1P43487 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RANBP1P43487 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RANBP1P43487 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.16■□□□□ 0.98
RANBP1P43487 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 SUZ12P1-203ENST00000578195 985 ntBASIC21.16■□□□□ 0.98
RANBP1P43487 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RANBP1P43487 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RANBP1P43487 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.15■□□□□ 0.98
RANBP1P43487 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.15■□□□□ 0.98
RANBP1P43487 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RANBP1P43487 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RANBP1P43487 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RANBP1P43487 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RANBP1P43487 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RANBP1P43487 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
RANBP1P43487 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.14■□□□□ 0.97
RANBP1P43487 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RANBP1P43487 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RANBP1P43487 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RANBP1P43487 AC233723.2-201ENST00000623798 2106 ntBASIC21.13■□□□□ 0.97
RANBP1P43487 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RANBP1P43487 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.12■□□□□ 0.97
RANBP1P43487 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.12■□□□□ 0.97
RANBP1P43487 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RANBP1P43487 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.11■□□□□ 0.97
RANBP1P43487 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RANBP1P43487 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RANBP1P43487 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.11■□□□□ 0.97
RANBP1P43487 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RANBP1P43487 AC110285.7-201ENST00000624417 1536 ntBASIC21.11■□□□□ 0.97
RANBP1P43487 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RANBP1P43487 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RANBP1P43487 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RANBP1P43487 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.11■□□□□ 0.97
RANBP1P43487 DUSP8P3-201ENST00000399571 1760 ntBASIC21.1■□□□□ 0.97
RANBP1P43487 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.1■□□□□ 0.97
RANBP1P43487 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RANBP1P43487 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RANBP1P43487 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms