Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.21■■□□□ 1.31
HMGCLP35914 AC135731.1-201ENST00000569415 2548 ntBASIC23.21■■□□□ 1.31
HMGCLP35914 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCLP35914 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCLP35914 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HMGCLP35914 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.2■■□□□ 1.3
HMGCLP35914 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
HMGCLP35914 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
HMGCLP35914 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HMGCLP35914 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.19■■□□□ 1.3
HMGCLP35914 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCLP35914 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGCLP35914 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.19■■□□□ 1.3
HMGCLP35914 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.19■■□□□ 1.3
HMGCLP35914 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.19■■□□□ 1.3
HMGCLP35914 AF131216.4-201ENST00000638924 1588 ntBASIC23.18■■□□□ 1.3
HMGCLP35914 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLP35914 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.18■■□□□ 1.3
HMGCLP35914 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLP35914 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
HMGCLP35914 AC137630.3-201ENST00000607245 391 ntBASIC23.18■■□□□ 1.3
HMGCLP35914 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLP35914 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGCLP35914 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.17■■□□□ 1.3
HMGCLP35914 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
HMGCLP35914 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.17■■□□□ 1.3
HMGCLP35914 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLP35914 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HMGCLP35914 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGCLP35914 LINC01124-201ENST00000409786 2117 ntBASIC23.17■■□□□ 1.3
HMGCLP35914 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HMGCLP35914 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.16■■□□□ 1.3
HMGCLP35914 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
HMGCLP35914 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
HMGCLP35914 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HMGCLP35914 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLP35914 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HMGCLP35914 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLP35914 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLP35914 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HMGCLP35914 AL451085.2-201ENST00000605085 799 ntBASIC23.15■■□□□ 1.3
HMGCLP35914 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGCLP35914 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.15■■□□□ 1.3
HMGCLP35914 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.15■■□□□ 1.3
HMGCLP35914 LINC00543-201ENST00000567234 1845 ntBASIC23.15■■□□□ 1.3
HMGCLP35914 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.14■■□□□ 1.3
HMGCLP35914 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.14■■□□□ 1.3
HMGCLP35914 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLP35914 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLP35914 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.14■■□□□ 1.29
HMGCLP35914 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
HMGCLP35914 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.14■■□□□ 1.29
HMGCLP35914 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLP35914 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLP35914 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLP35914 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HMGCLP35914 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLP35914 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.13■■□□□ 1.29
HMGCLP35914 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLP35914 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.13■■□□□ 1.29
HMGCLP35914 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.13■■□□□ 1.29
HMGCLP35914 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
HMGCLP35914 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.13■■□□□ 1.29
HMGCLP35914 AC141586.4-201ENST00000624558 1573 ntBASIC23.13■■□□□ 1.29
HMGCLP35914 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLP35914 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGCLP35914 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.12■■□□□ 1.29
HMGCLP35914 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGCLP35914 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGCLP35914 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
HMGCLP35914 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGCLP35914 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGCLP35914 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.11■■□□□ 1.29
HMGCLP35914 AC009299.2-201ENST00000482477 511 ntBASIC23.11■■□□□ 1.29
HMGCLP35914 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
HMGCLP35914 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLP35914 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
HMGCLP35914 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGCLP35914 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLP35914 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
HMGCLP35914 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLP35914 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGCLP35914 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
HMGCLP35914 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGCLP35914 BX664725.1-201ENST00000438252 379 ntBASIC23.1■■□□□ 1.29
HMGCLP35914 Z92544.1-202ENST00000571933 1220 ntBASIC23.1■■□□□ 1.29
HMGCLP35914 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms