Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PGK1P00558 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.12■■□□□ 1.77
PGK1P00558 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PGK1P00558 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PGK1P00558 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PGK1P00558 AF213884.3-201ENST00000563833 479 ntBASIC26.12■■□□□ 1.77
PGK1P00558 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
PGK1P00558 AC097639.1-201ENST00000565519 1891 ntBASIC26.12■■□□□ 1.77
PGK1P00558 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PGK1P00558 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
PGK1P00558 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.11■■□□□ 1.77
PGK1P00558 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PGK1P00558 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
PGK1P00558 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.11■■□□□ 1.77
PGK1P00558 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.11■■□□□ 1.77
PGK1P00558 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PGK1P00558 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PGK1P00558 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PGK1P00558 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.1■■□□□ 1.77
PGK1P00558 AC104564.3-201ENST00000582367 638 ntBASIC26.1■■□□□ 1.77
PGK1P00558 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.1■■□□□ 1.77
PGK1P00558 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PGK1P00558 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PGK1P00558 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PGK1P00558 AC004448.1-201ENST00000458332 883 ntBASIC26.09■■□□□ 1.77
PGK1P00558 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PGK1P00558 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.09■■□□□ 1.77
PGK1P00558 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.09■■□□□ 1.77
PGK1P00558 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PGK1P00558 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
PGK1P00558 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PGK1P00558 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
PGK1P00558 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PGK1P00558 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.07■■□□□ 1.76
PGK1P00558 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PGK1P00558 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.07■■□□□ 1.76
PGK1P00558 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
PGK1P00558 MIR939-201ENST00000401314 82 ntBASIC26.06■■□□□ 1.76
PGK1P00558 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.06■■□□□ 1.76
PGK1P00558 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PGK1P00558 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PGK1P00558 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PGK1P00558 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PGK1P00558 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PGK1P00558 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.05■■□□□ 1.76
PGK1P00558 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.05■■□□□ 1.76
PGK1P00558 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PGK1P00558 AP001330.3-201ENST00000520123 633 ntBASIC26.05■■□□□ 1.76
PGK1P00558 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PGK1P00558 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PGK1P00558 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PGK1P00558 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PGK1P00558 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PGK1P00558 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PGK1P00558 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PGK1P00558 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PGK1P00558 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.03■■□□□ 1.76
PGK1P00558 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PGK1P00558 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.03■■□□□ 1.76
PGK1P00558 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.03■■□□□ 1.76
PGK1P00558 AC005703.6-201ENST00000623265 1329 ntBASIC26.03■■□□□ 1.76
PGK1P00558 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.02■■□□□ 1.76
PGK1P00558 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.02■■□□□ 1.76
PGK1P00558 DUX4L19-201ENST00000557448 1267 ntBASIC26.02■■□□□ 1.76
PGK1P00558 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PGK1P00558 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PGK1P00558 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PGK1P00558 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
PGK1P00558 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PGK1P00558 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PGK1P00558 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PGK1P00558 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PGK1P00558 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.01■■□□□ 1.75
PGK1P00558 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PGK1P00558 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26■■□□□ 1.75
PGK1P00558 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26■■□□□ 1.75
PGK1P00558 SYT6-210ENST00000641643 1587 ntBASIC25.99■■□□□ 1.75
PGK1P00558 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PGK1P00558 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.99■■□□□ 1.75
PGK1P00558 MIR4767-201ENST00000582827 78 ntBASIC25.99■■□□□ 1.75
PGK1P00558 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.99■■□□□ 1.75
PGK1P00558 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PGK1P00558 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.98■■□□□ 1.75
PGK1P00558 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.98■■□□□ 1.75
PGK1P00558 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PGK1P00558 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PGK1P00558 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms