Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL3O75679 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.66■■□□□ 1.22
RFPL3O75679 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.66■■□□□ 1.22
RFPL3O75679 AL136162.1-201ENST00000607711 1078 ntBASIC22.66■■□□□ 1.22
RFPL3O75679 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.66■■□□□ 1.22
RFPL3O75679 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL3O75679 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL3O75679 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL3O75679 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL3O75679 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RFPL3O75679 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.65■■□□□ 1.22
RFPL3O75679 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL3O75679 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL3O75679 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RFPL3O75679 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.65■■□□□ 1.22
RFPL3O75679 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.65■■□□□ 1.22
RFPL3O75679 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL3O75679 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RFPL3O75679 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.64■■□□□ 1.22
RFPL3O75679 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RFPL3O75679 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL3O75679 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL3O75679 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RFPL3O75679 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.64■■□□□ 1.21
RFPL3O75679 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL3O75679 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL3O75679 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL3O75679 AC135279.3-201ENST00000610945 1311 ntBASIC22.63■■□□□ 1.21
RFPL3O75679 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RFPL3O75679 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL3O75679 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL3O75679 SRD5A1P1-201ENST00000442297 786 ntBASIC22.63■■□□□ 1.21
RFPL3O75679 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL3O75679 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL3O75679 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL3O75679 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RFPL3O75679 SUDS3P1-201ENST00000505831 966 ntBASIC22.62■■□□□ 1.21
RFPL3O75679 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.62■■□□□ 1.21
RFPL3O75679 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.62■■□□□ 1.21
RFPL3O75679 AL031432.3-201ENST00000607698 485 ntBASIC22.62■■□□□ 1.21
RFPL3O75679 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.62■■□□□ 1.21
RFPL3O75679 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RFPL3O75679 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.61■■□□□ 1.21
RFPL3O75679 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.61■■□□□ 1.21
RFPL3O75679 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RFPL3O75679 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.61■■□□□ 1.21
RFPL3O75679 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RFPL3O75679 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFPL3O75679 EDA-201ENST00000338901 1233 ntBASIC22.6■■□□□ 1.21
RFPL3O75679 AC026271.2-201ENST00000428091 497 ntBASIC22.6■■□□□ 1.21
RFPL3O75679 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.6■■□□□ 1.21
RFPL3O75679 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.6■■□□□ 1.21
RFPL3O75679 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.6■■□□□ 1.21
RFPL3O75679 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL3O75679 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL3O75679 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.6■■□□□ 1.21
RFPL3O75679 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL3O75679 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL3O75679 AC090877.2-201ENST00000558441 1738 ntBASIC22.6■■□□□ 1.21
RFPL3O75679 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.59■■□□□ 1.21
RFPL3O75679 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL3O75679 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL3O75679 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
RFPL3O75679 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.58■■□□□ 1.21
RFPL3O75679 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFPL3O75679 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.58■■□□□ 1.21
RFPL3O75679 MIR5787-201ENST00000611784 55 ntBASIC22.58■■□□□ 1.21
RFPL3O75679 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.58■■□□□ 1.21
RFPL3O75679 AL355001.2-201ENST00000620617 1191 ntBASIC22.58■■□□□ 1.21
RFPL3O75679 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFPL3O75679 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RFPL3O75679 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RFPL3O75679 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RFPL3O75679 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL3O75679 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL3O75679 AC024257.2-201ENST00000549699 147 ntBASIC22.57■■□□□ 1.2
RFPL3O75679 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.57■■□□□ 1.2
RFPL3O75679 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RFPL3O75679 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.57■■□□□ 1.2
RFPL3O75679 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL3O75679 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL3O75679 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.56■■□□□ 1.2
RFPL3O75679 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL3O75679 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL3O75679 AC104564.3-201ENST00000582367 638 ntBASIC22.56■■□□□ 1.2
RFPL3O75679 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RFPL3O75679 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.56■■□□□ 1.2
RFPL3O75679 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RFPL3O75679 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL3O75679 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.55■■□□□ 1.2
RFPL3O75679 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL3O75679 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.55■■□□□ 1.2
RFPL3O75679 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RFPL3O75679 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL3O75679 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL3O75679 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.55■■□□□ 1.2
RFPL3O75679 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.55■■□□□ 1.2
RFPL3O75679 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL3O75679 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.54■■□□□ 1.2
RFPL3O75679 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms