Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.76■□□□□ 0.75
SSNA1O43805 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSNA1O43805 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSNA1O43805 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.76■□□□□ 0.75
SSNA1O43805 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.76■□□□□ 0.75
SSNA1O43805 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SSNA1O43805 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSNA1O43805 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSNA1O43805 AC110285.7-201ENST00000624417 1536 ntBASIC19.76■□□□□ 0.75
SSNA1O43805 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.75■□□□□ 0.75
SSNA1O43805 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.75■□□□□ 0.75
SSNA1O43805 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.75■□□□□ 0.75
SSNA1O43805 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.75■□□□□ 0.75
SSNA1O43805 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.75■□□□□ 0.75
SSNA1O43805 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSNA1O43805 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSNA1O43805 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSNA1O43805 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.74■□□□□ 0.75
SSNA1O43805 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.74■□□□□ 0.75
SSNA1O43805 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SSNA1O43805 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.74■□□□□ 0.75
SSNA1O43805 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.74■□□□□ 0.75
SSNA1O43805 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.74■□□□□ 0.75
SSNA1O43805 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSNA1O43805 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.74■□□□□ 0.75
SSNA1O43805 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSNA1O43805 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSNA1O43805 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.73■□□□□ 0.75
SSNA1O43805 C1orf229-201ENST00000623686 2258 ntBASIC19.73■□□□□ 0.75
SSNA1O43805 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSNA1O43805 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSNA1O43805 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSNA1O43805 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSNA1O43805 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSNA1O43805 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SSNA1O43805 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.72■□□□□ 0.75
SSNA1O43805 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSNA1O43805 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSNA1O43805 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSNA1O43805 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSNA1O43805 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
SSNA1O43805 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.71■□□□□ 0.75
SSNA1O43805 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.71■□□□□ 0.75
SSNA1O43805 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSNA1O43805 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSNA1O43805 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSNA1O43805 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSNA1O43805 AC137767.1-201ENST00000602918 1920 ntBASIC19.7■□□□□ 0.74
SSNA1O43805 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SSNA1O43805 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SSNA1O43805 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SSNA1O43805 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 AL391121.1-201ENST00000607967 1349 ntBASIC19.7■□□□□ 0.74
SSNA1O43805 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSNA1O43805 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSNA1O43805 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSNA1O43805 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SSNA1O43805 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSNA1O43805 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSNA1O43805 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSNA1O43805 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSNA1O43805 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
SSNA1O43805 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSNA1O43805 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSNA1O43805 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSNA1O43805 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.68■□□□□ 0.74
SSNA1O43805 LINC00526-201ENST00000581067 1875 ntBASIC19.68■□□□□ 0.74
SSNA1O43805 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSNA1O43805 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSNA1O43805 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSNA1O43805 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
SSNA1O43805 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSNA1O43805 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.67■□□□□ 0.74
SSNA1O43805 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.67■□□□□ 0.74
SSNA1O43805 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.67■□□□□ 0.74
SSNA1O43805 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.67■□□□□ 0.74
SSNA1O43805 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SSNA1O43805 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.67■□□□□ 0.74
SSNA1O43805 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.67■□□□□ 0.74
SSNA1O43805 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSNA1O43805 AC127496.7-201ENST00000625110 1798 ntBASIC19.67■□□□□ 0.74
SSNA1O43805 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSNA1O43805 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SSNA1O43805 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms