Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
RTCAO00442 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RTCAO00442 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCAO00442 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.16■■□□□ 1.14
RTCAO00442 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
RTCAO00442 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCAO00442 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.15■■□□□ 1.14
RTCAO00442 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RTCAO00442 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCAO00442 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RTCAO00442 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.15■■□□□ 1.14
RTCAO00442 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTCAO00442 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.15■■□□□ 1.14
RTCAO00442 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.14■■□□□ 1.14
RTCAO00442 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.14■■□□□ 1.14
RTCAO00442 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.14■■□□□ 1.14
RTCAO00442 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
RTCAO00442 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTCAO00442 AC120024.1-201ENST00000562672 995 ntBASIC22.14■■□□□ 1.13
RTCAO00442 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.14■■□□□ 1.13
RTCAO00442 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RTCAO00442 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RTCAO00442 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCAO00442 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTCAO00442 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.13■■□□□ 1.13
RTCAO00442 MIR4508-201ENST00000584178 70 ntBASIC22.13■■□□□ 1.13
RTCAO00442 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.13■■□□□ 1.13
RTCAO00442 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RTCAO00442 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RTCAO00442 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTCAO00442 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCAO00442 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.12■■□□□ 1.13
RTCAO00442 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.12■■□□□ 1.13
RTCAO00442 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTCAO00442 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCAO00442 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.12■■□□□ 1.13
RTCAO00442 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTCAO00442 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.11■■□□□ 1.13
RTCAO00442 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTCAO00442 LINC00543-201ENST00000567234 1845 ntBASIC22.11■■□□□ 1.13
RTCAO00442 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.11■■□□□ 1.13
RTCAO00442 AC011551.1-201ENST00000614101 683 ntBASIC22.11■■□□□ 1.13
RTCAO00442 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
RTCAO00442 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCAO00442 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTCAO00442 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.1■■□□□ 1.13
RTCAO00442 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.1■■□□□ 1.13
RTCAO00442 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTCAO00442 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.09■■□□□ 1.13
RTCAO00442 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCAO00442 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RTCAO00442 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.09■■□□□ 1.13
RTCAO00442 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCAO00442 YBX1P4-201ENST00000392794 808 ntBASIC22.09■■□□□ 1.13
RTCAO00442 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCAO00442 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.09■■□□□ 1.13
RTCAO00442 THA1P-201ENST00000590384 1145 ntBASIC22.09■■□□□ 1.13
RTCAO00442 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTCAO00442 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTCAO00442 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.08■■□□□ 1.13
RTCAO00442 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
RTCAO00442 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTCAO00442 AC103724.3-201ENST00000564481 992 ntBASIC22.08■■□□□ 1.13
RTCAO00442 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTCAO00442 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTCAO00442 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RTCAO00442 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
RTCAO00442 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTCAO00442 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RTCAO00442 KRT18P24-201ENST00000344739 1156 ntBASIC22.07■■□□□ 1.12
RTCAO00442 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTCAO00442 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTCAO00442 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.06■■□□□ 1.12
RTCAO00442 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.06■■□□□ 1.12
RTCAO00442 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTCAO00442 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTCAO00442 AC004812.2-201ENST00000611079 2094 ntBASIC22.05■■□□□ 1.12
RTCAO00442 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTCAO00442 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.05■■□□□ 1.12
RTCAO00442 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RTCAO00442 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.05■■□□□ 1.12
RTCAO00442 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTCAO00442 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.04■■□□□ 1.12
RTCAO00442 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTCAO00442 MIR4281-201ENST00000580852 62 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms