Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.76■■□□□ 1.39
SHISA7A6NL88 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.75■■□□□ 1.39
SHISA7A6NL88 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.75■■□□□ 1.39
SHISA7A6NL88 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHISA7A6NL88 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.75■■□□□ 1.39
SHISA7A6NL88 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHISA7A6NL88 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SHISA7A6NL88 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SHISA7A6NL88 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
SHISA7A6NL88 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.74■■□□□ 1.39
SHISA7A6NL88 MIR6821-201ENST00000617625 74 ntBASIC23.74■■□□□ 1.39
SHISA7A6NL88 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHISA7A6NL88 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHISA7A6NL88 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHISA7A6NL88 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.73■■□□□ 1.39
SHISA7A6NL88 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHISA7A6NL88 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHISA7A6NL88 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHISA7A6NL88 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHISA7A6NL88 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
SHISA7A6NL88 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.72■■□□□ 1.39
SHISA7A6NL88 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.72■■□□□ 1.39
SHISA7A6NL88 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.72■■□□□ 1.39
SHISA7A6NL88 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SHISA7A6NL88 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.72■■□□□ 1.39
SHISA7A6NL88 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SHISA7A6NL88 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHISA7A6NL88 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHISA7A6NL88 ERN1-208ENST00000606895 2068 ntBASIC23.72■■□□□ 1.39
SHISA7A6NL88 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHISA7A6NL88 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.71■■□□□ 1.39
SHISA7A6NL88 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHISA7A6NL88 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHISA7A6NL88 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHISA7A6NL88 AC097639.1-201ENST00000565519 1891 ntBASIC23.7■■□□□ 1.39
SHISA7A6NL88 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHISA7A6NL88 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHISA7A6NL88 AC097381.1-201ENST00000429019 1296 ntBASIC23.7■■□□□ 1.38
SHISA7A6NL88 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.7■■□□□ 1.38
SHISA7A6NL88 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHISA7A6NL88 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.69■■□□□ 1.38
SHISA7A6NL88 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.69■■□□□ 1.38
SHISA7A6NL88 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SHISA7A6NL88 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHISA7A6NL88 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHISA7A6NL88 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 AC091305.1-201ENST00000479476 895 ntBASIC23.68■■□□□ 1.38
SHISA7A6NL88 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHISA7A6NL88 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 MIR4767-201ENST00000582827 78 ntBASIC23.68■■□□□ 1.38
SHISA7A6NL88 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 AC087623.3-201ENST00000607047 1098 ntBASIC23.68■■□□□ 1.38
SHISA7A6NL88 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.68■■□□□ 1.38
SHISA7A6NL88 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.67■■□□□ 1.38
SHISA7A6NL88 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.67■■□□□ 1.38
SHISA7A6NL88 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SHISA7A6NL88 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHISA7A6NL88 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
SHISA7A6NL88 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHISA7A6NL88 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHISA7A6NL88 DUX4L19-201ENST00000557448 1267 ntBASIC23.66■■□□□ 1.38
SHISA7A6NL88 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHISA7A6NL88 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHISA7A6NL88 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SHISA7A6NL88 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHISA7A6NL88 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHISA7A6NL88 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.65■■□□□ 1.38
SHISA7A6NL88 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.65■■□□□ 1.38
SHISA7A6NL88 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHISA7A6NL88 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SHISA7A6NL88 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHISA7A6NL88 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SHISA7A6NL88 SERBP1P1-201ENST00000396021 1160 ntBASIC23.64■■□□□ 1.37
SHISA7A6NL88 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.64■■□□□ 1.37
SHISA7A6NL88 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SHISA7A6NL88 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHISA7A6NL88 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHISA7A6NL88 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SHISA7A6NL88 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
SHISA7A6NL88 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHISA7A6NL88 AC005703.6-201ENST00000623265 1329 ntBASIC23.63■■□□□ 1.37
SHISA7A6NL88 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHISA7A6NL88 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHISA7A6NL88 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHISA7A6NL88 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms