Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 SMPD5-203ENST00000639008 1464 ntBASIC19.22■□□□□ 0.67
MSGN1A6NI15 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSGN1A6NI15 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSGN1A6NI15 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSGN1A6NI15 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.21■□□□□ 0.67
MSGN1A6NI15 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MSGN1A6NI15 AC092296.2-201ENST00000589470 999 ntBASIC19.21■□□□□ 0.67
MSGN1A6NI15 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MSGN1A6NI15 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSGN1A6NI15 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.21■□□□□ 0.67
MSGN1A6NI15 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
MSGN1A6NI15 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MSGN1A6NI15 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MSGN1A6NI15 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSGN1A6NI15 LINC00565-201ENST00000562710 2331 ntBASIC19.2■□□□□ 0.66
MSGN1A6NI15 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.2■□□□□ 0.66
MSGN1A6NI15 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MSGN1A6NI15 EP400NL-214ENST00000641289 2402 ntBASIC19.2■□□□□ 0.66
MSGN1A6NI15 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.2■□□□□ 0.66
MSGN1A6NI15 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MSGN1A6NI15 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSGN1A6NI15 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
MSGN1A6NI15 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MSGN1A6NI15 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MSGN1A6NI15 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MSGN1A6NI15 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
MSGN1A6NI15 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MSGN1A6NI15 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.19■□□□□ 0.66
MSGN1A6NI15 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.18■□□□□ 0.66
MSGN1A6NI15 ECEL1P2-201ENST00000461596 1295 ntBASIC19.18■□□□□ 0.66
MSGN1A6NI15 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.18■□□□□ 0.66
MSGN1A6NI15 AC025884.2-201ENST00000553429 711 ntBASIC19.18■□□□□ 0.66
MSGN1A6NI15 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
MSGN1A6NI15 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSGN1A6NI15 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSGN1A6NI15 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSGN1A6NI15 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MSGN1A6NI15 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 GPX1-201ENST00000419349 1106 ntBASIC19.17■□□□□ 0.66
MSGN1A6NI15 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.17■□□□□ 0.66
MSGN1A6NI15 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MSGN1A6NI15 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MSGN1A6NI15 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.17■□□□□ 0.66
MSGN1A6NI15 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.16■□□□□ 0.66
MSGN1A6NI15 MIR3960-201ENST00000583311 91 ntBASIC19.16■□□□□ 0.66
MSGN1A6NI15 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.16■□□□□ 0.66
MSGN1A6NI15 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MSGN1A6NI15 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSGN1A6NI15 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSGN1A6NI15 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSGN1A6NI15 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.15■□□□□ 0.66
MSGN1A6NI15 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MSGN1A6NI15 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MSGN1A6NI15 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MSGN1A6NI15 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.14■□□□□ 0.66
MSGN1A6NI15 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MSGN1A6NI15 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSGN1A6NI15 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSGN1A6NI15 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSGN1A6NI15 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.14■□□□□ 0.65
MSGN1A6NI15 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MSGN1A6NI15 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MSGN1A6NI15 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MSGN1A6NI15 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSGN1A6NI15 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
MSGN1A6NI15 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.13■□□□□ 0.65
MSGN1A6NI15 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
MSGN1A6NI15 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MSGN1A6NI15 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSGN1A6NI15 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.13■□□□□ 0.65
MSGN1A6NI15 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSGN1A6NI15 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MSGN1A6NI15 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSGN1A6NI15 AC233723.2-201ENST00000623798 2106 ntBASIC19.12■□□□□ 0.65
MSGN1A6NI15 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.12■□□□□ 0.65
MSGN1A6NI15 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.12■□□□□ 0.65
MSGN1A6NI15 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MSGN1A6NI15 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.12■□□□□ 0.65
MSGN1A6NI15 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSGN1A6NI15 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.12■□□□□ 0.65
MSGN1A6NI15 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
MSGN1A6NI15 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.11■□□□□ 0.65
MSGN1A6NI15 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSGN1A6NI15 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSGN1A6NI15 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MSGN1A6NI15 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.11■□□□□ 0.65
MSGN1A6NI15 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MSGN1A6NI15 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms