Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LOC102724428A0A0B4J2F2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LOC102724428A0A0B4J2F2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
LOC102724428A0A0B4J2F2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
LOC102724428A0A0B4J2F2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 DUX4L19-201ENST00000557448 1267 ntBASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.39
LOC102724428A0A0B4J2F2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30■■■□□ 2.39
LOC102724428A0A0B4J2F2 SF1-220ENST00000626028 704 ntTSL 2 BASIC30■■■□□ 2.39
LOC102724428A0A0B4J2F2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LOC102724428A0A0B4J2F2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC30■■■□□ 2.39
LOC102724428A0A0B4J2F2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LOC102724428A0A0B4J2F2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
LOC102724428A0A0B4J2F2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 MIR6821-201ENST00000617625 74 ntBASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
LOC102724428A0A0B4J2F2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 AC091305.1-201ENST00000479476 895 ntBASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
LOC102724428A0A0B4J2F2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 AC005703.6-201ENST00000623265 1329 ntBASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 ERN1-208ENST00000606895 2068 ntBASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC29.96■■■□□ 2.39
LOC102724428A0A0B4J2F2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
LOC102724428A0A0B4J2F2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
LOC102724428A0A0B4J2F2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
LOC102724428A0A0B4J2F2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.94■■■□□ 2.38
LOC102724428A0A0B4J2F2 MIR4767-201ENST00000582827 78 ntBASIC29.94■■■□□ 2.38
LOC102724428A0A0B4J2F2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
LOC102724428A0A0B4J2F2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
LOC102724428A0A0B4J2F2 SYT6-210ENST00000641643 1587 ntBASIC29.94■■■□□ 2.38
LOC102724428A0A0B4J2F2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 AC097381.1-201ENST00000429019 1296 ntBASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.93■■■□□ 2.38
LOC102724428A0A0B4J2F2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
LOC102724428A0A0B4J2F2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC29.92■■■□□ 2.38
LOC102724428A0A0B4J2F2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 MAG-206ENST00000597035 542 ntTSL 4 BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
LOC102724428A0A0B4J2F2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC29.9■■■□□ 2.38
LOC102724428A0A0B4J2F2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
LOC102724428A0A0B4J2F2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.9■■■□□ 2.38
LOC102724428A0A0B4J2F2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 AC087623.3-201ENST00000607047 1098 ntBASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
LOC102724428A0A0B4J2F2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
LOC102724428A0A0B4J2F2 SERBP1P1-201ENST00000396021 1160 ntBASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms