Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 AC133561.1-201ENST00000568600 2415 ntBASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV4A0A0B4J268 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 KRT18P60-201ENST00000312876 1297 ntBASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV4A0A0B4J268 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV4A0A0B4J268 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 NTF6A-201ENST00000591175 560 ntBASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
TRAV4A0A0B4J268 CLDN5-201ENST00000403084 2357 ntBASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 HLA-L-211ENST00000482052 1765 ntBASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV4A0A0B4J268 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 AC090877.2-201ENST00000558441 1738 ntBASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV4A0A0B4J268 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV4A0A0B4J268 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV4A0A0B4J268 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV4A0A0B4J268 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 LONRF2P2-201ENST00000439212 571 ntBASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 AC139795.1-202ENST00000500444 432 ntBASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV4A0A0B4J268 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV4A0A0B4J268 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms