Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 MIR3648-1-201ENST00000615959 180 ntBASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-1A0A0A6YYK1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-1A0A0A6YYK1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SMPD5-203ENST00000639008 1464 ntBASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV8-1A0A0A6YYK1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AC060814.1-201ENST00000554326 538 ntBASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AC016575.1-201ENST00000607026 382 ntBASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-1A0A0A6YYK1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV8-1A0A0A6YYK1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-1A0A0A6YYK1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV8-1A0A0A6YYK1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-1A0A0A6YYK1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-1A0A0A6YYK1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV8-1A0A0A6YYK1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV8-1A0A0A6YYK1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms