Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 AC004790.2-201ENST00000623588 572 ntBASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 AP000550.4-202ENST00000639755 178 ntBASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 HSPA7-201ENST00000445535 1927 ntBASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 AC136759.1-202ENST00000530858 2194 ntBASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.77□□□□□ -0.36
RCL1Q9Y2P8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 OR7E14P-202ENST00000530490 1290 ntBASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 AL009183.1-201ENST00000603760 355 ntBASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 REXO1L6P-202ENST00000619970 1078 ntBASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RCL1Q9Y2P8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RCL1Q9Y2P8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms