Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 MEP1AP4-201ENST00000423244 1087 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 EEF1DP4-201ENST00000446006 880 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 GIMAP3P-201ENST00000495150 836 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 AC055876.2-201ENST00000531834 546 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 HNRNPUP1-201ENST00000554987 333 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 AC068587.6-202ENST00000641839 5619 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 AL109954.1-202ENST00000564051 2148 ntBASIC18.49■□□□□ 0.55
DDX11Q96FC9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX11Q96FC9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX11Q96FC9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 TNRC18P2-201ENST00000417666 2714 ntBASIC18.48■□□□□ 0.55
DDX11Q96FC9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 AC097359.3-201ENST00000603982 1210 ntBASIC18.48■□□□□ 0.55
DDX11Q96FC9 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.48■□□□□ 0.55
DDX11Q96FC9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX11Q96FC9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX11Q96FC9 C18orf15-201ENST00000623680 2534 ntBASIC18.48■□□□□ 0.55
DDX11Q96FC9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX11Q96FC9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX11Q96FC9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms