Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 MIR6799-201ENST00000620297 69 ntBASIC16.32■□□□□ 0.2
USP13Q92995 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 SOCS2P1-201ENST00000417727 557 ntBASIC16.31■□□□□ 0.2
USP13Q92995 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
USP13Q92995 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.31■□□□□ 0.2
USP13Q92995 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.31■□□□□ 0.2
USP13Q92995 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.31■□□□□ 0.2
USP13Q92995 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 AC063926.3-201ENST00000624734 5658 ntBASIC16.31■□□□□ 0.2
USP13Q92995 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.31■□□□□ 0.2
USP13Q92995 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.31■□□□□ 0.2
USP13Q92995 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
USP13Q92995 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.3■□□□□ 0.2
USP13Q92995 AL121723.1-201ENST00000445194 1519 ntBASIC16.3■□□□□ 0.2
USP13Q92995 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
USP13Q92995 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 C1QBPP1-201ENST00000400117 770 ntBASIC16.3■□□□□ 0.2
USP13Q92995 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.3■□□□□ 0.2
USP13Q92995 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.3■□□□□ 0.2
USP13Q92995 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 AC000095.1-201ENST00000603208 874 ntBASIC16.3■□□□□ 0.2
USP13Q92995 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.3■□□□□ 0.2
USP13Q92995 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
USP13Q92995 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP13Q92995 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
USP13Q92995 PDIA3P1-201ENST00000471856 1510 ntBASIC16.29■□□□□ 0.2
USP13Q92995 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
USP13Q92995 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
USP13Q92995 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
USP13Q92995 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
USP13Q92995 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
USP13Q92995 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP13Q92995 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP13Q92995 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms