Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RDH11Q8TC12 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RDH11Q8TC12 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RDH11Q8TC12 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RDH11Q8TC12 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RDH11Q8TC12 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RDH11Q8TC12 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.33■□□□□ 0.04
RDH11Q8TC12 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 TARDBPP1-201ENST00000442013 1203 ntBASIC15.32■□□□□ 0.04
RDH11Q8TC12 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 DNAJB3-201ENST00000446806 729 ntBASIC15.32■□□□□ 0.04
RDH11Q8TC12 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ALG1L8P-201ENST00000533887 760 ntBASIC15.32■□□□□ 0.04
RDH11Q8TC12 AC015910.1-201ENST00000579400 975 ntBASIC15.32■□□□□ 0.04
RDH11Q8TC12 AC018529.1-201ENST00000613063 361 ntBASIC15.32■□□□□ 0.04
RDH11Q8TC12 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.32■□□□□ 0.04
RDH11Q8TC12 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.32■□□□□ 0.04
RDH11Q8TC12 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RDH11Q8TC12 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 SNX18-202ENST00000343017 3140 ntBASIC15.31■□□□□ 0.04
RDH11Q8TC12 AP000845.1-201ENST00000581677 2131 ntBASIC15.31■□□□□ 0.04
RDH11Q8TC12 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 ALG1L5P-201ENST00000482043 771 ntBASIC15.31■□□□□ 0.04
RDH11Q8TC12 AC112482.1-201ENST00000492080 688 ntBASIC15.31■□□□□ 0.04
RDH11Q8TC12 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 KRT8P12-202ENST00000472924 1397 ntBASIC15.31■□□□□ 0.04
RDH11Q8TC12 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.31■□□□□ 0.04
RDH11Q8TC12 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RDH11Q8TC12 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms