Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 NKIRAS1-205ENST00000421515 2018 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 TREML4-201ENST00000341495 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PCAT29-201ENST00000558411 2121 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 FRMD1-201ENST00000283309 3067 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 SLC1A7-205ENST00000620288 3378 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 POMGNT1-203ENST00000396420 3480 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PRYP5-201ENST00000451909 266 ntBASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PRYP6-201ENST00000514804 343 ntBASIC9.44□□□□□ -0.9
SVIPQ8NHG7 NIFKP4-201ENST00000567275 1192 ntBASIC9.44□□□□□ -0.9
SVIPQ8NHG7 AL137246.1-201ENST00000607072 977 ntBASIC9.44□□□□□ -0.9
SVIPQ8NHG7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 LINC01311-201ENST00000565162 1445 ntBASIC9.44□□□□□ -0.9
SVIPQ8NHG7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PPM1K-209ENST00000514204 2962 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 FOSB-201ENST00000353609 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 GALNT17-205ENST00000618959 3012 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SLC16A6-202ENST00000580666 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 CCDC149-202ENST00000389609 2127 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 ACSM6-203ENST00000394005 1592 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 INPP5B-206ENST00000458109 3979 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AC005838.2-201ENST00000584643 317 ntBASIC9.43□□□□□ -0.9
SVIPQ8NHG7 AL139424.3-202ENST00000641619 917 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms