RNA–Protein interactions for RNA: ENST00000557887.1

LINC00933-201, long intergenic non-protein coding RNA 933, humanhuman

TSL 2 BASIC

Gene LINC00933, Length 2,606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00933-201ENST00000557887 NISCHQ9Y2I1 1504 aa17.76■□□□□ 0.43
LINC00933-201ENST00000557887 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
LINC00933-201ENST00000557887 MYT1Q01538 1121 aa16.84■□□□□ 0.29
LINC00933-201ENST00000557887 HRCP23327 699 aa16.62■□□□□ 0.25
LINC00933-201ENST00000557887 PPARGC1BQ86YN6 1023 aaKnown RBP16.17■□□□□ 0.18
LINC00933-201ENST00000557887 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
LINC00933-201ENST00000557887 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
LINC00933-201ENST00000557887 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
LINC00933-201ENST00000557887 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
LINC00933-201ENST00000557887 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
LINC00933-201ENST00000557887 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
LINC00933-201ENST00000557887 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.07
LINC00933-201ENST00000557887 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
LINC00933-201ENST00000557887 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
LINC00933-201ENST00000557887 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
LINC00933-201ENST00000557887 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
LINC00933-201ENST00000557887 GTF3C3Q9Y5Q9 886 aa15.4■□□□□ 0.06
LINC00933-201ENST00000557887 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
LINC00933-201ENST00000557887 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.05
LINC00933-201ENST00000557887 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
LINC00933-201ENST00000557887 DCAF1Q9Y4B6 1507 aa15.18■□□□□ 0.02
LINC00933-201ENST00000557887 APLP2Q06481 763 aa15.18■□□□□ 0.02
LINC00933-201ENST00000557887 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
LINC00933-201ENST00000557887 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0.01
LINC00933-201ENST00000557887 ANP32EQ9BTT0 268 aa15.08■□□□□ 0
LINC00933-201ENST00000557887 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
LINC00933-201ENST00000557887 AEBP2Q6ZN18 517 aaPredicted RBP15.02■□□□□ -0
LINC00933-201ENST00000557887 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
LINC00933-201ENST00000557887 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
LINC00933-201ENST00000557887 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
LINC00933-201ENST00000557887 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
LINC00933-201ENST00000557887 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
LINC00933-201ENST00000557887 TSHZ2Q9NRE2 1034 aa14.65□□□□□ -0.06
LINC00933-201ENST00000557887 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
LINC00933-201ENST00000557887 ANO8Q9HCE9 1232 aaPredicted RBP14.53□□□□□ -0.08
LINC00933-201ENST00000557887 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
LINC00933-201ENST00000557887 SUPT16HQ9Y5B9 1047 aaKnown RBP14.48□□□□□ -0.09
LINC00933-201ENST00000557887 CLSPNQ9HAW4 1339 aa14.47□□□□□ -0.09
LINC00933-201ENST00000557887 SLC24A1O60721 1099 aa14.44□□□□□ -0.1
LINC00933-201ENST00000557887 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
LINC00933-201ENST00000557887 UBE2Q2Q8WVN8 375 aa14.38□□□□□ -0.11
LINC00933-201ENST00000557887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
LINC00933-201ENST00000557887 MIER1Q8N108 512 aa14.34□□□□□ -0.11
LINC00933-201ENST00000557887 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.11
LINC00933-201ENST00000557887 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
LINC00933-201ENST00000557887 EIF5BO60841 1220 aaKnown RBP14.28□□□□□ -0.12
LINC00933-201ENST00000557887 ABCC9O60706 1549 aa14.27□□□□□ -0.12
LINC00933-201ENST00000557887 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.13
LINC00933-201ENST00000557887 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
LINC00933-201ENST00000557887 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
LINC00933-201ENST00000557887 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
LINC00933-201ENST00000557887 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
LINC00933-201ENST00000557887 MSH5O43196 834 aa14.18□□□□□ -0.14
LINC00933-201ENST00000557887 ERICH6BQ5W0A0 696 aa14.18□□□□□ -0.14
LINC00933-201ENST00000557887 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
LINC00933-201ENST00000557887 RB1CC1Q8TDY2 1594 aa14.16□□□□□ -0.14
LINC00933-201ENST00000557887 DEKP35659 375 aaKnown RBP14.16□□□□□ -0.14
LINC00933-201ENST00000557887 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
LINC00933-201ENST00000557887 PKNOX2Q96KN3 472 aa14.03□□□□□ -0.16
LINC00933-201ENST00000557887 BCANQ96GW7 911 aa14.01□□□□□ -0.17
LINC00933-201ENST00000557887 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
LINC00933-201ENST00000557887 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
LINC00933-201ENST00000557887 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.98□□□□□ -0.17
LINC00933-201ENST00000557887 CECR2Q9BXF3 1484 aa13.96□□□□□ -0.18
LINC00933-201ENST00000557887 FKBP8Q14318 412 aa13.9□□□□□ -0.18
LINC00933-201ENST00000557887 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
LINC00933-201ENST00000557887 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
LINC00933-201ENST00000557887 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
LINC00933-201ENST00000557887 WIZO95785 1651 aa13.85□□□□□ -0.19
LINC00933-201ENST00000557887 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
LINC00933-201ENST00000557887 ITGAEP38570 1179 aa13.79□□□□□ -0.2
LINC00933-201ENST00000557887 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
LINC00933-201ENST00000557887 NEFLP07196 543 aa13.74□□□□□ -0.21
LINC00933-201ENST00000557887 NBR1Q14596 966 aa13.73□□□□□ -0.21
LINC00933-201ENST00000557887 NACADO15069 1562 aa13.71□□□□□ -0.21
LINC00933-201ENST00000557887 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
LINC00933-201ENST00000557887 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
LINC00933-201ENST00000557887 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
LINC00933-201ENST00000557887 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
LINC00933-201ENST00000557887 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
LINC00933-201ENST00000557887 NOP58Q9Y2X3 529 aaKnown RBP13.65□□□□□ -0.22
LINC00933-201ENST00000557887 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
LINC00933-201ENST00000557887 SOGA1O94964 1423 aa13.62□□□□□ -0.23
LINC00933-201ENST00000557887 RTL5Q5HYW3 569 aaPredicted RBP13.61□□□□□ -0.23
LINC00933-201ENST00000557887 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
LINC00933-201ENST00000557887 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
LINC00933-201ENST00000557887 ZMYND15Q9H091 742 aa13.59□□□□□ -0.23
LINC00933-201ENST00000557887 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
LINC00933-201ENST00000557887 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
LINC00933-201ENST00000557887 GLIPR1L2Q4G1C9 344 aa13.57□□□□□ -0.24
LINC00933-201ENST00000557887 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
LINC00933-201ENST00000557887 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
LINC00933-201ENST00000557887 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
LINC00933-201ENST00000557887 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.24
LINC00933-201ENST00000557887 TNIKQ9UKE5 1360 aa13.52□□□□□ -0.25
LINC00933-201ENST00000557887 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
LINC00933-201ENST00000557887 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
LINC00933-201ENST00000557887 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
LINC00933-201ENST00000557887 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
LINC00933-201ENST00000557887 WASHC2AQ641Q2 1341 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms