Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CICP12-201ENST00000455801 843 ntBASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 AGPAT5P1-201ENST00000455855 1019 ntBASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 DBP-202ENST00000593500 712 ntTSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 AC007326.1-201ENST00000604539 458 ntBASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.06■□□□□ 0.8
COL22A1Q8NFW1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 AC092171.3-201ENST00000610122 2651 ntBASIC20.05■□□□□ 0.8
COL22A1Q8NFW1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 AC003102.2-201ENST00000589195 1469 ntBASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 AC127383.1-201ENST00000444697 1800 ntBASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 TLE1P1-201ENST00000422965 589 ntBASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 AC018695.6-201ENST00000614011 534 ntBASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 AL360270.3-201ENST00000609118 1348 ntBASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
COL22A1Q8NFW1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 RN7SL470P-201ENST00000583069 259 ntBASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL22A1Q8NFW1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms