Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 AL359183.1-201ENST00000623796 2132 ntBASIC13.52□□□□□ -0.25
BEST4Q8NFU0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
BEST4Q8NFU0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 AC105339.3-201ENST00000560043 636 ntBASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
BEST4Q8NFU0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 FAM210CP-201ENST00000445714 574 ntBASIC13.5□□□□□ -0.25
BEST4Q8NFU0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.5□□□□□ -0.25
BEST4Q8NFU0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms