Protein–RNA interactions for Protein: Q8N1G4

LRRC47, Leucine-rich repeat-containing protein 47, humanhuman

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47Q8N1G4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 AC016694.1-201ENST00000434179 700 ntBASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 KRT18P25-201ENST00000508931 1278 ntBASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 AL033527.4-201ENST00000641026 673 ntBASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC47Q8N1G4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 KLF2P2-201ENST00000416807 1039 ntBASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 AC145423.3-201ENST00000615987 467 ntBASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 AC148477.4-201ENST00000613430 1793 ntBASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 AC132872.4-202ENST00000622924 2756 ntBASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRRC47Q8N1G4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 AC007787.1-201ENST00000588095 1583 ntBASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 HLA-V-201ENST00000429037 534 ntBASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 AP000812.2-201ENST00000538934 718 ntBASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC47Q8N1G4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms