Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AL645728.2-202ENST00000641679 227 ntBASIC14.1□□□□□ -0.15
ATG4DQ86TL0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATG4DQ86TL0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATG4DQ86TL0 WASH3P-207ENST00000560956 1394 ntBASIC14.09□□□□□ -0.15
ATG4DQ86TL0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ATG4DQ86TL0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
ATG4DQ86TL0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ATG4DQ86TL0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
ATG4DQ86TL0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATG4DQ86TL0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATG4DQ86TL0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.08□□□□□ -0.16
ATG4DQ86TL0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 AL158212.4-201ENST00000624062 1286 ntBASIC14.08□□□□□ -0.16
ATG4DQ86TL0 AC004840.1-201ENST00000636359 365 ntBASIC14.08□□□□□ -0.16
ATG4DQ86TL0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms